Gene
RNA
| Item | Value |
|---|---|
| gene id | G114478 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12818120 ~ 12822908 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU131362 | False | 495 | lncRNA | 0.46 | 2 | 12818120 | 12820133 |
| TU131360 | True | 480 | lncRNA | 0.46 | 3 | 12819520 | 12822908 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937723 | LOC106561136 | coding | downstream | 102510 | 12683093 ~ 12715610 (-) |
| LOC118937724 | NA | coding | downstream | 134345 | 12683058 ~ 12683775 (-) |
| pop1 | LOC106561139 | coding | downstream | 144246 | 12639702 ~ 12673874 (-) |
| LOC118944197 | NA | coding | downstream | 200426 | 12617506 ~ 12617694 (-) |
| LOC118937718 | LOC106590816 | coding | downstream | 264601 | 12549299 ~ 12553519 (-) |
| pabpc1a | LOC106593394 | coding | upstream | 101564 | 12924472 ~ 12934534 (-) |
| LOC118944179 | NA | coding | upstream | 102449 | 12925357 ~ 12925439 (-) |
| LOC110507522 | LOC106606066 | coding | upstream | 240182 | 13063090 ~ 13083743 (-) |
| LOC110507534 | LOC106606051 | coding | upstream | 263261 | 13086169 ~ 13094428 (-) |
| LOC118937728 | NA | coding | upstream | 274637 | 13097545 ~ 13127127 (-) |
| G114477 | NA | non-coding | downstream | 6960 | 12810849 ~ 12811160 (-) |
| G114459 | NA | non-coding | downstream | 55139 | 12762217 ~ 12762981 (-) |
| G114454 | NA | non-coding | downstream | 64280 | 12752747 ~ 12753840 (-) |
| G114450 | NA | non-coding | downstream | 69070 | 12747829 ~ 12749050 (-) |
| G114443 | NA | non-coding | downstream | 78361 | 12739242 ~ 12739759 (-) |
| G114486 | NA | non-coding | upstream | 38559 | 12861467 ~ 12862187 (-) |
| G114497 | NA | non-coding | upstream | 95434 | 12918342 ~ 12919001 (-) |
| G114502 | NA | non-coding | upstream | 114635 | 12937543 ~ 12937830 (-) |
| G114506 | NA | non-coding | upstream | 120577 | 12943485 ~ 12961942 (-) |
| G114510 | NA | non-coding | upstream | 165037 | 12987945 ~ 12988251 (-) |
| G114442 | NA | other | downstream | 78963 | 12735314 ~ 12739157 (-) |
| G114424 | NA | other | downstream | 108805 | 12707827 ~ 12709315 (-) |
| G114402 | NA | other | downstream | 204440 | 12610669 ~ 12613680 (-) |
| G114390 | NA | other | downstream | 232980 | 12584027 ~ 12585140 (-) |
| LOC110513475 | LOC106592216 | other | downstream | 1159452 | 11471939 ~ 12290710 (-) |
| LOC110513400 | snrk | other | upstream | 472925 | 13250306 ~ 13324680 (-) |
| G114812 | NA | other | upstream | 507840 | 13330748 ~ 13332506 (-) |
| LOC110534058 | LOC106593045 | other | upstream | 671540 | 13494448 ~ 13500298 (-) |
| G114928 | LOC106574568 | other | upstream | 751627 | 13574535 ~ 13582606 (-) |
