G114237 (LOC106529126)


Basic Information

Item Value
gene id G114237
gene name LOC106529126
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12822980 ~ 12823190 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131034
GTTCAGGTAGTTGACCATGGCGCTGCCAGACAGAGATCCGGTGATGCTGGCCCCAGCCAGGGCCATGGTGGAGGCGTTCTCACTCAGGTTGTCCCTCATGGCGCCCATCCGGTCCACGTGGCTCCCGCTGGCACTCAGACTGCCCGTCATGCCCCCCACGCTACCTTCTCCGATGCTGGGGTTGTTCCTGGTGTCCGCCACAGAGGTCGTG

Function

NR:

description
E3 ubiquitin-protein ligase RNF19A-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131034 True 211 lncRNA 0.64 1 12822980 12823190

Neighbor

gene id symbol gene type direction distance location
spag1b LOC106592835 coding upstream 46148 12716574 ~ 12776832 (+)
LOC110510520 rida coding upstream 142830 12674085 ~ 12680150 (+)
LOC110513835 nipal2 coding upstream 206783 12562337 ~ 12616197 (+)
LOC118944185 NA coding upstream 350550 12430935 ~ 12555437 (+)
LOC110511179 NA coding upstream 523023 12299517 ~ 12300453 (+)
LOC110525149 LOC106589684 coding downstream 90441 12913631 ~ 12916798 (+)
LOC118937726 NA coding downstream 103631 12926821 ~ 12927702 (+)
LOC110507515 LOC106575761 coding downstream 223689 13046879 ~ 13061306 (+)
LOC118936508 ano10 coding downstream 369955 13193145 ~ 13241855 (+)
LOC110507612 NA coding downstream 501747 13324937 ~ 13330676 (+)
G114238 NA non-coding upstream 906 12821457 ~ 12822074 (+)
G114235 NA non-coding upstream 5496 12813680 ~ 12817484 (+)
G114272 NA non-coding upstream 12856 12809922 ~ 12810124 (+)
G114271 NA non-coding upstream 42311 12780311 ~ 12780669 (+)
G114270 NA non-coding upstream 50067 12772183 ~ 12772913 (+)
G114239 NA non-coding downstream 558 12823748 ~ 12824903 (+)
G114273 NA non-coding downstream 3330 12826520 ~ 12826808 (+)
G114279 NA non-coding downstream 15555 12838745 ~ 12839087 (+)
G114292 NA non-coding downstream 29873 12853063 ~ 12854732 (+)
G114297 NA non-coding downstream 44753 12867943 ~ 12871261 (+)
G114263 NA other upstream 60153 12762232 ~ 12762827 (+)
G114244 NA other upstream 101665 12720730 ~ 12721315 (+)
G114243 NA other upstream 102287 12720408 ~ 12720693 (+)
G113396 NA other upstream 1113203 11708603 ~ 11709777 (+)
G113313 LOC102781083 other upstream 1340239 11477976 ~ 11482741 (+)
G114323 NA other downstream 126170 12949360 ~ 12964930 (+)
LOC110520769 LOC106593286 other downstream 798787 13604304 ~ 13623972 (+)
LOC110520780 LOC106574729 other downstream 878420 13663839 ~ 13756558 (+)
LOC110535330 LOC106574784 other downstream 1138071 13961020 ~ 13976561 (+)
G115190 NA other downstream 1318692 14141882 ~ 14144267 (+)

Expression


Co-expression Network