G114239


Basic Information

Item Value
gene id G114239
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12823748 ~ 12824903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131036
AGTAGCTTGCGCCCCACTCCCTGCGGTCATCTGGTTCTCGTCATCGAACTCGATGCGGACTCCTTTCCCATTACCAGTGGAGACGCCACAGCCCCCGCTGCGACACAGAGAGATGGGCACCACGCCGTACACGTACGCCAGCATGATGGGCACGCCGATGcctggacacacagagagagagacagttaaccACCTCACACCCTGGGGAGGGACACCAGACAACCAGCAGAGACCACTGTGTCTCCTAAGAGCAGTCGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTCGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTCGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTCGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTCGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTCGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTCGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTCGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTCGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTTGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTCGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTCGGTCACTACTAGCTCATCTAAACAACCAGAGACCCCTGTGTCTCCTAAGAGCAGTCGGTCACTACTCAGGGGACATGATGacagacagtacagtatactgaCCACAGGGGACATGATGACAGACAGAATACAGTATACTGACCACAGGGGACATGATGACAGACAGAGTACAGTATACTGACCACAGGGGACATGATGACAGACAGAGTACAGTATACTGACCACAGGGGACATGATGACAGACAGAGTACAGTATACTGACCACAGGGGACATGATGACAGAG

Function

NR:

description
E3 ubiquitin-protein ligase RNF19A-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131036 True 1156 lncRNA 0.52 1 12823748 12824903

Neighbor

gene id symbol gene type direction distance location
spag1b LOC106592835 coding upstream 46916 12716574 ~ 12776832 (+)
LOC110510520 rida coding upstream 143598 12674085 ~ 12680150 (+)
LOC110513835 nipal2 coding upstream 207551 12562337 ~ 12616197 (+)
LOC118944185 NA coding upstream 351318 12430935 ~ 12555437 (+)
LOC110511179 NA coding upstream 523791 12299517 ~ 12300453 (+)
LOC110525149 LOC106589684 coding downstream 88728 12913631 ~ 12916798 (+)
LOC118937726 NA coding downstream 101918 12926821 ~ 12927702 (+)
LOC110507515 LOC106575761 coding downstream 221976 13046879 ~ 13061306 (+)
LOC118936508 ano10 coding downstream 368242 13193145 ~ 13241855 (+)
LOC110507612 NA coding downstream 500034 13324937 ~ 13330676 (+)
G114237 LOC106529126 non-coding upstream 558 12822980 ~ 12823190 (+)
G114238 NA non-coding upstream 1674 12821457 ~ 12822074 (+)
G114235 NA non-coding upstream 6264 12813680 ~ 12817484 (+)
G114272 NA non-coding upstream 13624 12809922 ~ 12810124 (+)
G114271 NA non-coding upstream 43079 12780311 ~ 12780669 (+)
G114273 NA non-coding downstream 1617 12826520 ~ 12826808 (+)
G114279 NA non-coding downstream 13842 12838745 ~ 12839087 (+)
G114292 NA non-coding downstream 28160 12853063 ~ 12854732 (+)
G114297 NA non-coding downstream 43040 12867943 ~ 12871261 (+)
G114286 LOC106591903 non-coding downstream 99569 12924472 ~ 12925273 (+)
G114263 NA other upstream 60921 12762232 ~ 12762827 (+)
G114244 NA other upstream 102433 12720730 ~ 12721315 (+)
G114243 NA other upstream 103055 12720408 ~ 12720693 (+)
G113396 NA other upstream 1113971 11708603 ~ 11709777 (+)
G113313 LOC102781083 other upstream 1341007 11477976 ~ 11482741 (+)
G114323 NA other downstream 124457 12949360 ~ 12964930 (+)
LOC110520769 LOC106593286 other downstream 797074 13604304 ~ 13623972 (+)
LOC110520780 LOC106574729 other downstream 876707 13663839 ~ 13756558 (+)
LOC110535330 LOC106574784 other downstream 1136358 13961020 ~ 13976561 (+)
G115190 NA other downstream 1316979 14141882 ~ 14144267 (+)

Expression


Co-expression Network