G114273


Basic Information

Item Value
gene id G114273
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12826520 ~ 12826808 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131078
gtattattctgtgttcatataaaacaactaactgtattattctgtgttcatataaaacaactaactgtattattctgtgttcatataaaacaactgtattattctgtctgtgttcatataaaacaactaactgtattattctgtgttcatataaaacaactaactgtattattctgtgttcatataaaacaactaactgtattattctgtctgtgttcatataaaacaactgtattattctgtgttcatataaaacaactgtattattctgtctgtgttcatataaaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106595118

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131078 True 289 lncRNA 0.25 1 12826520 12826808

Neighbor

gene id symbol gene type direction distance location
spag1b LOC106592835 coding upstream 49688 12716574 ~ 12776832 (+)
LOC110510520 rida coding upstream 146370 12674085 ~ 12680150 (+)
LOC110513835 nipal2 coding upstream 210323 12562337 ~ 12616197 (+)
LOC118944185 NA coding upstream 354090 12430935 ~ 12555437 (+)
LOC110511179 NA coding upstream 526563 12299517 ~ 12300453 (+)
LOC110525149 LOC106589684 coding downstream 86823 12913631 ~ 12916798 (+)
LOC118937726 NA coding downstream 100013 12926821 ~ 12927702 (+)
LOC110507515 LOC106575761 coding downstream 220071 13046879 ~ 13061306 (+)
LOC118936508 ano10 coding downstream 366337 13193145 ~ 13241855 (+)
LOC110507612 NA coding downstream 498129 13324937 ~ 13330676 (+)
G114239 NA non-coding upstream 1617 12823748 ~ 12824903 (+)
G114237 LOC106529126 non-coding upstream 3330 12822980 ~ 12823190 (+)
G114238 NA non-coding upstream 4446 12821457 ~ 12822074 (+)
G114235 NA non-coding upstream 9036 12813680 ~ 12817484 (+)
G114272 NA non-coding upstream 16396 12809922 ~ 12810124 (+)
G114279 NA non-coding downstream 11937 12838745 ~ 12839087 (+)
G114292 NA non-coding downstream 26255 12853063 ~ 12854732 (+)
G114297 NA non-coding downstream 41135 12867943 ~ 12871261 (+)
G114286 LOC106591903 non-coding downstream 97664 12924472 ~ 12925273 (+)
G114319 NA non-coding downstream 110765 12937573 ~ 12938036 (+)
G114263 NA other upstream 63693 12762232 ~ 12762827 (+)
G114244 NA other upstream 105205 12720730 ~ 12721315 (+)
G114243 NA other upstream 105827 12720408 ~ 12720693 (+)
G113396 NA other upstream 1116743 11708603 ~ 11709777 (+)
G113313 LOC102781083 other upstream 1343779 11477976 ~ 11482741 (+)
G114323 NA other downstream 122552 12949360 ~ 12964930 (+)
LOC110520769 LOC106593286 other downstream 795169 13604304 ~ 13623972 (+)
LOC110520780 LOC106574729 other downstream 874802 13663839 ~ 13756558 (+)
LOC110535330 LOC106574784 other downstream 1134453 13961020 ~ 13976561 (+)
G115190 NA other downstream 1315074 14141882 ~ 14144267 (+)

Expression


Co-expression Network