Gene
RNA
| Item | Value |
|---|---|
| gene id | G114279 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12838745 ~ 12839087 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU131084 | True | 291 | lncRNA | 0.50 | 2 | 12838745 | 12839087 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| spag1b | LOC106592835 | coding | upstream | 61913 | 12716574 ~ 12776832 (+) |
| LOC110510520 | rida | coding | upstream | 158595 | 12674085 ~ 12680150 (+) |
| LOC110513835 | nipal2 | coding | upstream | 222548 | 12562337 ~ 12616197 (+) |
| LOC118944185 | NA | coding | upstream | 366315 | 12430935 ~ 12555437 (+) |
| LOC110511179 | NA | coding | upstream | 538788 | 12299517 ~ 12300453 (+) |
| LOC110525149 | LOC106589684 | coding | downstream | 74544 | 12913631 ~ 12916798 (+) |
| LOC118937726 | NA | coding | downstream | 87734 | 12926821 ~ 12927702 (+) |
| LOC110507515 | LOC106575761 | coding | downstream | 207792 | 13046879 ~ 13061306 (+) |
| LOC118936508 | ano10 | coding | downstream | 354058 | 13193145 ~ 13241855 (+) |
| LOC110507612 | NA | coding | downstream | 485850 | 13324937 ~ 13330676 (+) |
| G114273 | NA | non-coding | upstream | 11937 | 12826520 ~ 12826808 (+) |
| G114239 | NA | non-coding | upstream | 13842 | 12823748 ~ 12824903 (+) |
| G114237 | LOC106529126 | non-coding | upstream | 15555 | 12822980 ~ 12823190 (+) |
| G114238 | NA | non-coding | upstream | 16671 | 12821457 ~ 12822074 (+) |
| G114235 | NA | non-coding | upstream | 21261 | 12813680 ~ 12817484 (+) |
| G114292 | NA | non-coding | downstream | 13976 | 12853063 ~ 12854732 (+) |
| G114297 | NA | non-coding | downstream | 28856 | 12867943 ~ 12871261 (+) |
| G114286 | LOC106591903 | non-coding | downstream | 85385 | 12924472 ~ 12925273 (+) |
| G114319 | NA | non-coding | downstream | 98486 | 12937573 ~ 12938036 (+) |
| G114320 | NA | non-coding | downstream | 105109 | 12944196 ~ 12969839 (+) |
| G114263 | NA | other | upstream | 75918 | 12762232 ~ 12762827 (+) |
| G114244 | NA | other | upstream | 117430 | 12720730 ~ 12721315 (+) |
| G114243 | NA | other | upstream | 118052 | 12720408 ~ 12720693 (+) |
| G113396 | NA | other | upstream | 1128968 | 11708603 ~ 11709777 (+) |
| G113313 | LOC102781083 | other | upstream | 1356004 | 11477976 ~ 11482741 (+) |
| G114323 | NA | other | downstream | 110273 | 12949360 ~ 12964930 (+) |
| LOC110520769 | LOC106593286 | other | downstream | 782890 | 13604304 ~ 13623972 (+) |
| LOC110520780 | LOC106574729 | other | downstream | 862523 | 13663839 ~ 13756558 (+) |
| LOC110535330 | LOC106574784 | other | downstream | 1122174 | 13961020 ~ 13976561 (+) |
| G115190 | NA | other | downstream | 1302795 | 14141882 ~ 14144267 (+) |
