G114486


Basic Information

Item Value
gene id G114486
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12861467 ~ 12862187 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131376
aGGGCAGACTGTGaacctcagctcagacacacacagggcagactgtgaacctcagctcagacacacacagggcagactgtgaacctcagctcagacacacacagggcagactgtgaacctcagctcagacacacacagggcagactgtgaacctcagctcagacacacacagggcagactgtgaacctcagctcagacacacacagggcagaCTGCGGGTCAGaacctcagctcagacacacacagggcagaCTGCGGGTCAGaacctcagctcagacacacacagggcagaCTGCGGGTCAGAACctcagctcagacacacTGGGCTGGTCCACAGACATTTCTGGATCAGATGAGATCATGTTGCCAATATTAGCACAGTTGGCAATGGACTTGAAATCATTTTGTGGTCTAAGCCCCAGTAGTAGAGACGAGTATAAATTCAGCCTTCTGTTGTCCCTgaaaccagggatgttctcatcTCAGTGTCCAAAATGAAATGAACACTTTCGGCCATTAGACAGACCTACTAAAGATCTAGCTGCTGCGGGTGTTTCAGTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131376 True 563 lncRNA 0.50 2 12861467 12862187

Neighbor

gene id symbol gene type direction distance location
LOC118937723 LOC106561136 coding downstream 145857 12683093 ~ 12715610 (-)
LOC118937724 NA coding downstream 177692 12683058 ~ 12683775 (-)
pop1 LOC106561139 coding downstream 187593 12639702 ~ 12673874 (-)
LOC118944197 NA coding downstream 243773 12617506 ~ 12617694 (-)
LOC118937718 LOC106590816 coding downstream 307948 12549299 ~ 12553519 (-)
pabpc1a LOC106593394 coding upstream 62285 12924472 ~ 12934534 (-)
LOC118944179 NA coding upstream 63170 12925357 ~ 12925439 (-)
LOC110507522 LOC106606066 coding upstream 200903 13063090 ~ 13083743 (-)
LOC110507534 LOC106606051 coding upstream 223982 13086169 ~ 13094428 (-)
LOC118937728 NA coding upstream 235358 13097545 ~ 13127127 (-)
G114478 NA non-coding downstream 38559 12818120 ~ 12822908 (-)
G114479 NA non-coding downstream 40385 12820171 ~ 12821082 (-)
G114477 NA non-coding downstream 50307 12810849 ~ 12811160 (-)
G114459 NA non-coding downstream 98486 12762217 ~ 12762981 (-)
G114454 NA non-coding downstream 107627 12752747 ~ 12753840 (-)
G114497 NA non-coding upstream 56155 12918342 ~ 12919001 (-)
G114502 NA non-coding upstream 75356 12937543 ~ 12937830 (-)
G114506 NA non-coding upstream 81298 12943485 ~ 12961942 (-)
G114510 NA non-coding upstream 125758 12987945 ~ 12988251 (-)
G114511 NA non-coding upstream 126233 12988420 ~ 12988629 (-)
G114442 NA other downstream 122310 12735314 ~ 12739157 (-)
G114424 NA other downstream 152152 12707827 ~ 12709315 (-)
G114402 NA other downstream 247787 12610669 ~ 12613680 (-)
G114390 NA other downstream 276327 12584027 ~ 12585140 (-)
LOC110513475 LOC106592216 other downstream 1202799 11471939 ~ 12290710 (-)
LOC110513400 snrk other upstream 433646 13250306 ~ 13324680 (-)
G114812 NA other upstream 468561 13330748 ~ 13332506 (-)
LOC110534058 LOC106593045 other upstream 632261 13494448 ~ 13500298 (-)
G114928 LOC106574568 other upstream 712348 13574535 ~ 13582606 (-)

Expression


Co-expression Network