G114297


Basic Information

Item Value
gene id G114297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12867943 ~ 12871261 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131112
GTGCACTTCCTCCTTTAGGGGCTGCTCGGAACCCTAACTACTACGGCGAAATAGCACAAGAGGATTCTCTTAAAACGAGGAGTGAGAAGGACAGCGCTTGCCAaaaggagggagaatagaggatATTGCATTTCAGTCAGAATATCCTGACAGCTGTACTGGTACGTGTTCTTCGCCAGGAGCAGATGTAGCGTTGTACTGTGTTATTCTGATGGGGGTTTGGGACAGGTCAACTAGCTAGCCCGTCTCCAGACAGGGTTGCAGAAGCCTCGCAGAATCAAACACTCAGCTCATCTGGACAAGAACGGAAGTCAGCAGAGAGGAGCTTATTCAAACTCCTCACACAGCTTTATTAAGACGATAAACTAGAACCAGCTGGGCACTGGCCTGAGAAAAGGTGCCTGAGagagttgagggagagagaggtccaACCCATACTGCTCCAGTCTTCTCCCTCAGCTCTAGTTCTGTGGTCCAACCCattctgctctctgctctcagcTCTAGCCCTGTGGTCCAACCCAGTCTGCTCTCAGTTCTAGTCCTGTGGTCCAACCCattctgctctctgctctcagcTCTAGCCCTGTGGTCCAACCCAGTCTGCTCTCAGTTCTAGTCCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTTCTGTGGTCCAACCCAGTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCAGTCTGCTCTCAACTCTAGTCCAACCCAGTCTGCTCTCAACTGTAGTCCTGTGGTCCAACCCAGTCTGCTCTCAACTCTAGTCCTGTGGTCCAACCCAGTCTTCTCTCTCAGATCTAGTTCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCAGTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCCAGTCTGCTCGCTCAGCTCTAGTTCTGTGGTCCAACCAATTCTGCTCTCAGATCTAGTCCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCAGTCTGCTCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCAGTCTGCTCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCGCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCAGTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCAGTCTGCTCTCAACTCTAGTCCAACCCAGTCTGCTCTCAGATCTAGTCCCGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGATCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGACCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCAACTCTAGCCCTGTGGTCCAACCCATTCGGCTCTCAACTCTAGCCCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGCCCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGACCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTCCTGTGGTCCAACCCAGTCTGCTCTCAACTCTAGTCCAACCCAGTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCCAGTCTGCTCGCTCAGCTCTAGTTCTGTGGTCCAACCGATTCTGCTCTCAGATCTAGTCCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTATGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCAGTCTGCTCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCAGTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCAGTCTGCTCTCAACTCTAGTCCTGTGGTCCAACCCAGTCTGCTCTCAGCTCTAGTCCAACCCAGTCTGCTCTCAGATCTAGTCCCGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAATTCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGATCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGACCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGATCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGCCCTGTGGTCCAACCCATTCTTCTCTCAGCTCTAGACCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCAGTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTCCTGTGGTCCAACCCAGTTTGCTCTCAACTCTAGTCCAACCCAGTCTGCTCTCAACTCTAGTCCTGTGGTCCAACCCAGTCTGCTCTCAGCTCTAGTCCAACCCAGTCTGCTCTCAGATCTAGTCCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAATTCTGTGGTCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGATCCAACCCATTCTGCTCTCTCAGCTCTAGTTCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGACCTGTGGTCCAACCCATTCTGCTCTCAGCTCTAGTTCTGTGGTTCAACCCATTCTGCTCTCAGctctagataacacagccacaaggA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131112 True 3290 lncRNA 0.53 2 12867943 12871261

Neighbor

gene id symbol gene type direction distance location
spag1b LOC106592835 coding upstream 91111 12716574 ~ 12776832 (+)
LOC110510520 rida coding upstream 187793 12674085 ~ 12680150 (+)
LOC110513835 nipal2 coding upstream 251746 12562337 ~ 12616197 (+)
LOC118944185 NA coding upstream 395513 12430935 ~ 12555437 (+)
LOC110511179 NA coding upstream 567986 12299517 ~ 12300453 (+)
LOC110525149 LOC106589684 coding downstream 42370 12913631 ~ 12916798 (+)
LOC118937726 NA coding downstream 55560 12926821 ~ 12927702 (+)
LOC110507515 LOC106575761 coding downstream 175618 13046879 ~ 13061306 (+)
LOC118936508 ano10 coding downstream 321884 13193145 ~ 13241855 (+)
LOC110507612 NA coding downstream 453676 13324937 ~ 13330676 (+)
G114292 NA non-coding upstream 13211 12853063 ~ 12854732 (+)
G114279 NA non-coding upstream 28856 12838745 ~ 12839087 (+)
G114273 NA non-coding upstream 41135 12826520 ~ 12826808 (+)
G114239 NA non-coding upstream 43040 12823748 ~ 12824903 (+)
G114237 LOC106529126 non-coding upstream 44753 12822980 ~ 12823190 (+)
G114286 LOC106591903 non-coding downstream 53211 12924472 ~ 12925273 (+)
G114319 NA non-coding downstream 66312 12937573 ~ 12938036 (+)
G114320 NA non-coding downstream 72935 12944196 ~ 12969839 (+)
G114322 NA non-coding downstream 80536 12951797 ~ 12954057 (+)
G114330 NA non-coding downstream 117164 12988425 ~ 12988629 (+)
G114263 NA other upstream 105116 12762232 ~ 12762827 (+)
G114244 NA other upstream 146628 12720730 ~ 12721315 (+)
G114243 NA other upstream 147250 12720408 ~ 12720693 (+)
G113396 NA other upstream 1158166 11708603 ~ 11709777 (+)
G113313 LOC102781083 other upstream 1385202 11477976 ~ 11482741 (+)
G114323 NA other downstream 78099 12949360 ~ 12964930 (+)
LOC110520769 LOC106593286 other downstream 750716 13604304 ~ 13623972 (+)
LOC110520780 LOC106574729 other downstream 830349 13663839 ~ 13756558 (+)
LOC110535330 LOC106574784 other downstream 1090000 13961020 ~ 13976561 (+)
G115190 NA other downstream 1270621 14141882 ~ 14144267 (+)

Expression


Co-expression Network