G114286 (LOC106591903)


Basic Information

Item Value
gene id G114286
gene name LOC106591903
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12924472 ~ 12925273 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131101
TTTTAAAGTGTTTGATATCTTTATTTAGCAGTTTTCAATCCAAATGACAAAGCACTCAGCTATCTGATCTCTGAACACAACAGCTGATATTCTGAGGACTGATACTTACCGGTTCTTAGCTGGGGACTCCGGCGGGGTTGGTGGGCTTCTGGGCGGACTCCTTGGCCTGGTGAGCCTGCAGCACAGCAACAGCCTCGTCCACCTTGGAGCGGAGAGACTCGGGAGACTCCAGCATGTGGAGCAACTCGGAGTTGTCTATCTCCAACAGCATGCCGGTGATCTTTCCAGCCAGGCTGGGGTGCATGTTTTGGATGAGAGGGAACAGACGCTCGCCTGGAgaatgaggagagggggagagagaggagaattcAGCATCAGTAAA

Function

NR:

description
polyadenylate-binding protein 1-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131101 True 382 lncRNA 0.37 2 12924472 12925273

Neighbor

gene id symbol gene type direction distance location
LOC110525149 LOC106589684 coding upstream 7674 12913631 ~ 12916798 (+)
spag1b LOC106592835 coding upstream 147640 12716574 ~ 12776832 (+)
LOC110510520 rida coding upstream 244322 12674085 ~ 12680150 (+)
LOC110513835 nipal2 coding upstream 308275 12562337 ~ 12616197 (+)
LOC118944185 NA coding upstream 452042 12430935 ~ 12555437 (+)
LOC118937726 NA coding downstream 1548 12926821 ~ 12927702 (+)
LOC110507515 LOC106575761 coding downstream 121606 13046879 ~ 13061306 (+)
LOC118936508 ano10 coding downstream 267872 13193145 ~ 13241855 (+)
LOC110507612 NA coding downstream 399664 13324937 ~ 13330676 (+)
LOC110507631 LOC106574283 coding downstream 457915 13383188 ~ 13387921 (+)
G114297 NA non-coding upstream 53211 12867943 ~ 12871261 (+)
G114292 NA non-coding upstream 69740 12853063 ~ 12854732 (+)
G114279 NA non-coding upstream 85385 12838745 ~ 12839087 (+)
G114273 NA non-coding upstream 97664 12826520 ~ 12826808 (+)
G114239 NA non-coding upstream 99569 12823748 ~ 12824903 (+)
G114319 NA non-coding downstream 12300 12937573 ~ 12938036 (+)
G114320 NA non-coding downstream 18923 12944196 ~ 12969839 (+)
G114322 NA non-coding downstream 26524 12951797 ~ 12954057 (+)
G114330 NA non-coding downstream 63152 12988425 ~ 12988629 (+)
G114335 NA non-coding downstream 82410 13007683 ~ 13007906 (+)
G114263 NA other upstream 161645 12762232 ~ 12762827 (+)
G114244 NA other upstream 203157 12720730 ~ 12721315 (+)
G114243 NA other upstream 203779 12720408 ~ 12720693 (+)
G113396 NA other upstream 1214695 11708603 ~ 11709777 (+)
G113313 LOC102781083 other upstream 1441731 11477976 ~ 11482741 (+)
G114323 NA other downstream 24087 12949360 ~ 12964930 (+)
LOC110520769 LOC106593286 other downstream 696704 13604304 ~ 13623972 (+)
LOC110520780 LOC106574729 other downstream 776337 13663839 ~ 13756558 (+)
LOC110535330 LOC106574784 other downstream 1035988 13961020 ~ 13976561 (+)
G115190 NA other downstream 1216609 14141882 ~ 14144267 (+)

Expression


Co-expression Network