G114506


Basic Information

Item Value
gene id G114506
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12943485 ~ 12961942 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131408
caggaactaatgggaatccataataaacccaggaagagtagctgctgtcctggcaggaactaatggggatccataataaaccacaggaagagtagctgctgtcttggcagaaactaatggggatccataataaaccccaggaagaatagctgctgccttggcagaaactaatggggatccataataaaaccccaggaagagtagctgctgccatggcagaaactaatggggatccataataaaccccaggaagactagctacTGCCTtatcaggaactaatggggatccataataaaccccaggaagagtagctgctgcattggcaggaactaatggggttccataataaaccccaggaagagtagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcaggaactaatgtggatccataataaaccctaggaagagtagctgctgccttggcaagaactaatggggatccataataaaccccaggaagactagctgctgccttggcaggaactaatggaaatccataataaaccccaggaaaactagctgctgccttggcaggaactaatggggatccataataaaccccaggaagactagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcaggaactaatgggtgtccataataaaccccaggaagagtagctgctgccttggcaggaactaatggggatccataataaactccaggaagagtagctgctgccttggcaggaactaatggggatccatactaaaccacaggaagagtagctgctgtcttggcaggaactaatggggatccataataaaccccaggaagactagctgctgccttggcaggaactaatggggatccataataaaccacaggaagagtagctgctgtcttggcaggaactaatggggatccatagtaaaccccgggaagactagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcagaaactaatggggatccataataaaccccaggaagactagctgctgccttatcaggaactaatggggatccataataaaccccaggaagactagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcaggaactaatggggaaccataataaaccccaggaagactagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcaggaactaatgggggtccataataaaccccaggaagagtagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcaggaactaatggggatccataataaactccaggaagagtagctgctgccttggcaggaactaatggggatccataataaactccaggaaaagtagctgctgccttggcaggaactaatggggatccataataaatacaataccAATGAGGTAtatctgttgttgttttagtaaATCTCAGTCTGGAAACGGTTACatttttagacatagtttcaacACAAGTATCCAAAATGATCTGGCTGCTTCCATTGGAC

Function

NR:

description
filaggrin-2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131408 True 1712 lncRNA 0.60 3 12943485 12961942

Neighbor

gene id symbol gene type direction distance location
pabpc1a LOC106593394 coding downstream 8951 12924472 ~ 12934534 (-)
LOC118944179 NA coding downstream 18046 12925357 ~ 12925439 (-)
LOC110525147 LOC106570794 coding downstream 53089 12813650 ~ 12890396 (-)
LOC118937723 LOC106561136 coding downstream 227875 12683093 ~ 12715610 (-)
LOC118937724 NA coding downstream 259710 12683058 ~ 12683775 (-)
LOC110507522 LOC106606066 coding upstream 101148 13063090 ~ 13083743 (-)
LOC110507534 LOC106606051 coding upstream 124227 13086169 ~ 13094428 (-)
LOC118937728 NA coding upstream 135603 13097545 ~ 13127127 (-)
abhd5a LOC106573494 coding upstream 214223 13176165 ~ 13189012 (-)
LOC118937744 NA coding upstream 285014 13246956 ~ 13250244 (-)
G114502 NA non-coding downstream 5655 12937543 ~ 12937830 (-)
G114497 NA non-coding downstream 24484 12918342 ~ 12919001 (-)
G114510 NA non-coding upstream 26003 12987945 ~ 12988251 (-)
G114511 NA non-coding upstream 26478 12988420 ~ 12988629 (-)
G114513 NA non-coding upstream 30356 12992298 ~ 12992590 (-)
G114514 NA non-coding upstream 31989 12993931 ~ 12994247 (-)
G114739 NA non-coding upstream 179005 13140947 ~ 13141231 (-)
G114442 NA other downstream 204328 12735314 ~ 12739157 (-)
G114424 NA other downstream 234170 12707827 ~ 12709315 (-)
G114402 NA other downstream 329805 12610669 ~ 12613680 (-)
G114390 NA other downstream 358345 12584027 ~ 12585140 (-)
LOC110513475 LOC106592216 other downstream 1284817 11471939 ~ 12290710 (-)
LOC110513400 snrk other upstream 333891 13250306 ~ 13324680 (-)
G114812 NA other upstream 368806 13330748 ~ 13332506 (-)
LOC110534058 LOC106593045 other upstream 532506 13494448 ~ 13500298 (-)
G114928 LOC106574568 other upstream 612593 13574535 ~ 13582606 (-)

Expression


Co-expression Network