G114322


Basic Information

Item Value
gene id G114322
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12951797 ~ 12954057 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131143
actcttcctggggtttattatggaaccccattagttcctgccaatgcagcagctactcttcctggggtttattatggatccccattagttcctgataaggcagcagctagtcttcctggggtttattatggatccccattagtttctgccatggtagcagctactcttcttggggttttcttatggatccccattagttcctgccaaggcagcagctagtcttcctggggtttattatggatccccattagtttctgccaaggcagcagctactcttcctggggtttattatggacccccattagtttctgccaaggtagcagctactctttctggggtttattatggatccccattagttcctgccaaggcagcagctagtcttcctggggtttattatggatccccattagtttctgccaaggtagcagctactcttcctggggtttattatggatccccattagttcctgccaaggcagcagctagtcttcctggggtttattatggatccccattagttcctgacaagacagcagctactcttcctgtggtttagtatggatccccattagttcctgccaaggcagcagctactcttcctggagtttattatggatccccattagttcctgccaaggcagcagctactcttcctggggtttattatagacccccattagttcctgccaagacagcagctactcttcctgtggtttattatggatccccattagttcctgccagggcagcagctactcttcctgggtttattatggattcccattagttcctgccaaggcagcagctactcttcctggggtttattatggacccccattagttcctgccaaggcagcagctactcttcctgaggtttattatggatccccattggttcctgccaaggcagcagctagtcttcctggggtttattatggatccccattagttcctgccaaggcagcagctagtcttcctggggtttattatggatccccattagttcctgccaaggcagcagctagtctttctggggtttattatggatccccattagttcctgccaaggcagcagctactcttcctggggtttattatggatccccattagttcctgccaaggcagcagctagtctttctggggtttattatggatccccattagttcctgccaaggcagcagatactcttcctggggtttattatggatccccattagttcctgcctaggcagcaactactcttcctggggtttattatggaaccccattagttcctgccaatgcagcagctactcttcctggggtttattatggatccccattagttcctgataaggcagcagctagtcttcctggggttttattatggatccccattagttcctgccaag

Function

NR:

description
filaggrin-2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131143 True 1396 lncRNA 0.48 2 12951797 12954057

Neighbor

gene id symbol gene type direction distance location
LOC118937726 NA coding upstream 24095 12926821 ~ 12927702 (+)
LOC110525149 LOC106589684 coding upstream 34999 12913631 ~ 12916798 (+)
spag1b LOC106592835 coding upstream 174965 12716574 ~ 12776832 (+)
LOC110510520 rida coding upstream 271647 12674085 ~ 12680150 (+)
LOC110513835 nipal2 coding upstream 335600 12562337 ~ 12616197 (+)
LOC110507515 LOC106575761 coding downstream 92822 13046879 ~ 13061306 (+)
LOC118936508 ano10 coding downstream 239088 13193145 ~ 13241855 (+)
LOC110507612 NA coding downstream 370880 13324937 ~ 13330676 (+)
LOC110507631 LOC106574283 coding downstream 429131 13383188 ~ 13387921 (+)
LOC110517609 sbp1 coding downstream 620440 13574497 ~ 13582605 (+)
G114319 NA non-coding upstream 13761 12937573 ~ 12938036 (+)
G114286 LOC106591903 non-coding upstream 26524 12924472 ~ 12925273 (+)
G114297 NA non-coding upstream 80536 12867943 ~ 12871261 (+)
G114292 NA non-coding upstream 97065 12853063 ~ 12854732 (+)
G114279 NA non-coding upstream 112710 12838745 ~ 12839087 (+)
G114330 NA non-coding downstream 34368 12988425 ~ 12988629 (+)
G114335 NA non-coding downstream 53626 13007683 ~ 13007906 (+)
G114537 LOC106606051 non-coding downstream 136020 13090077 ~ 13090488 (+)
G114553 NA non-coding downstream 167867 13121924 ~ 13122191 (+)
G114554 NA non-coding downstream 169452 13123509 ~ 13123745 (+)
G114263 NA other upstream 188970 12762232 ~ 12762827 (+)
G114244 NA other upstream 230482 12720730 ~ 12721315 (+)
G114243 NA other upstream 231104 12720408 ~ 12720693 (+)
G113396 NA other upstream 1242020 11708603 ~ 11709777 (+)
G113313 LOC102781083 other upstream 1469056 11477976 ~ 11482741 (+)
LOC110520769 LOC106593286 other downstream 667920 13604304 ~ 13623972 (+)
LOC110520780 LOC106574729 other downstream 747553 13663839 ~ 13756558 (+)
LOC110535330 LOC106574784 other downstream 1007204 13961020 ~ 13976561 (+)
G115190 NA other downstream 1187825 14141882 ~ 14144267 (+)
G115189 NA other downstream 1280457 14234514 ~ 14236854 (+)

Expression


Co-expression Network