Gene
RNA
| Item | Value |
|---|---|
| gene id | G114510 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12987945 ~ 12988251 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU131412 | True | 307 | lncRNA | 0.37 | 1 | 12987945 | 12988251 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pabpc1a | LOC106593394 | coding | downstream | 53411 | 12924472 ~ 12934534 (-) |
| LOC118944179 | NA | coding | downstream | 62506 | 12925357 ~ 12925439 (-) |
| LOC110525147 | LOC106570794 | coding | downstream | 97549 | 12813650 ~ 12890396 (-) |
| LOC118937723 | LOC106561136 | coding | downstream | 272335 | 12683093 ~ 12715610 (-) |
| LOC118937724 | NA | coding | downstream | 304170 | 12683058 ~ 12683775 (-) |
| LOC110507522 | LOC106606066 | coding | upstream | 74839 | 13063090 ~ 13083743 (-) |
| LOC110507534 | LOC106606051 | coding | upstream | 97918 | 13086169 ~ 13094428 (-) |
| LOC118937728 | NA | coding | upstream | 109294 | 13097545 ~ 13127127 (-) |
| abhd5a | LOC106573494 | coding | upstream | 187914 | 13176165 ~ 13189012 (-) |
| LOC118937744 | NA | coding | upstream | 258705 | 13246956 ~ 13250244 (-) |
| G114506 | NA | non-coding | downstream | 26003 | 12943485 ~ 12961942 (-) |
| G114502 | NA | non-coding | downstream | 50115 | 12937543 ~ 12937830 (-) |
| G114497 | NA | non-coding | downstream | 68944 | 12918342 ~ 12919001 (-) |
| G114486 | NA | non-coding | downstream | 125758 | 12861467 ~ 12862187 (-) |
| G114478 | NA | non-coding | downstream | 165037 | 12818120 ~ 12822908 (-) |
| G114511 | NA | non-coding | upstream | 169 | 12988420 ~ 12988629 (-) |
| G114513 | NA | non-coding | upstream | 4047 | 12992298 ~ 12992590 (-) |
| G114514 | NA | non-coding | upstream | 5680 | 12993931 ~ 12994247 (-) |
| G114739 | NA | non-coding | upstream | 152696 | 13140947 ~ 13141231 (-) |
| G114741 | NA | non-coding | upstream | 162941 | 13151192 ~ 13153857 (-) |
| G114442 | NA | other | downstream | 248788 | 12735314 ~ 12739157 (-) |
| G114424 | NA | other | downstream | 278630 | 12707827 ~ 12709315 (-) |
| G114402 | NA | other | downstream | 374265 | 12610669 ~ 12613680 (-) |
| G114390 | NA | other | downstream | 402805 | 12584027 ~ 12585140 (-) |
| LOC110513475 | LOC106592216 | other | downstream | 1329277 | 11471939 ~ 12290710 (-) |
| LOC110513400 | snrk | other | upstream | 307582 | 13250306 ~ 13324680 (-) |
| G114812 | NA | other | upstream | 342497 | 13330748 ~ 13332506 (-) |
| LOC110534058 | LOC106593045 | other | upstream | 506197 | 13494448 ~ 13500298 (-) |
| G114928 | LOC106574568 | other | upstream | 586284 | 13574535 ~ 13582606 (-) |
