G114330



Basic Information


Item Value
gene id G114330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12988425 ~ 12988629 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU131153
agttcttgccaaggcagcagctagtcttcctggggtttattatggatccccattagttcctgccaagacagcagctactcttcctgtggtttattatggatccccattagttcctgccaaggcagcagctactcttcctggggtttattatggatccccattagttcctgccaagacagcagctactcttcctgtggtttagtat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU131153 True 205 lncRNA 0.48 1 12988425 12988629

Neighbor


gene id symbol gene type direction distance location
LOC118937726 NA coding upstream 60723 12926821 ~ 12927702 (+)
LOC110525149 LOC106589684 coding upstream 71627 12913631 ~ 12916798 (+)
spag1b LOC106592835 coding upstream 211593 12716574 ~ 12776832 (+)
LOC110510520 rida coding upstream 308275 12674085 ~ 12680150 (+)
LOC110513835 nipal2 coding upstream 372228 12562337 ~ 12616197 (+)
LOC110507515 LOC106575761 coding downstream 58250 13046879 ~ 13061306 (+)
LOC118936508 ano10 coding downstream 204516 13193145 ~ 13241855 (+)
LOC110507612 NA coding downstream 336308 13324937 ~ 13330676 (+)
LOC110507631 LOC106574283 coding downstream 394559 13383188 ~ 13387921 (+)
LOC110517609 sbp1 coding downstream 585868 13574497 ~ 13582605 (+)
G114320 NA non-coding upstream 18586 12944196 ~ 12969839 (+)
G114322 NA non-coding upstream 34368 12951797 ~ 12954057 (+)
G114319 NA non-coding upstream 50389 12937573 ~ 12938036 (+)
G114286 LOC106591903 non-coding upstream 63152 12924472 ~ 12925273 (+)
G114297 NA non-coding upstream 117164 12867943 ~ 12871261 (+)
G114335 NA non-coding downstream 19054 13007683 ~ 13007906 (+)
G114537 LOC106606051 non-coding downstream 101448 13090077 ~ 13090488 (+)
G114553 NA non-coding downstream 133295 13121924 ~ 13122191 (+)
G114554 NA non-coding downstream 134880 13123509 ~ 13123745 (+)
G114598 NA non-coding downstream 148770 13137399 ~ 13137614 (+)
G114323 NA other upstream 23495 12949360 ~ 12964930 (+)
G114263 NA other upstream 225598 12762232 ~ 12762827 (+)
G114244 NA other upstream 267110 12720730 ~ 12721315 (+)
G114243 NA other upstream 267732 12720408 ~ 12720693 (+)
G113396 NA other upstream 1278648 11708603 ~ 11709777 (+)
LOC110520769 LOC106593286 other downstream 633348 13604304 ~ 13623972 (+)
LOC110520780 LOC106574729 other downstream 712981 13663839 ~ 13756558 (+)
LOC110535330 LOC106574784 other downstream 972632 13961020 ~ 13976561 (+)
G115190 NA other downstream 1153253 14141882 ~ 14144267 (+)
G115189 NA other downstream 1245885 14234514 ~ 14236854 (+)

Expression



Co-expression Network