G114335


Basic Information

Item Value
gene id G114335
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13007683 ~ 13007906 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131158
acttgtcccgaagccactcctgagttgtcttggctgtgtgcttagggtcgttgtcctgttggaagatgaaccttcgccacagtctgaggtcctgaacactctggagcaggttttcatcaaggatctctctgtactttgctctgttagtctttacctcgatcctgaccagtccctgccgctgaaaaacatccccacagcatgatgctgccaccaccatacttcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131158 True 224 lncRNA 0.43 1 13007683 13007906

Neighbor

gene id symbol gene type direction distance location
LOC118937726 NA coding upstream 79981 12926821 ~ 12927702 (+)
LOC110525149 LOC106589684 coding upstream 90885 12913631 ~ 12916798 (+)
spag1b LOC106592835 coding upstream 230851 12716574 ~ 12776832 (+)
LOC110510520 rida coding upstream 327533 12674085 ~ 12680150 (+)
LOC110513835 nipal2 coding upstream 391486 12562337 ~ 12616197 (+)
LOC110507515 LOC106575761 coding downstream 38973 13046879 ~ 13061306 (+)
LOC118936508 ano10 coding downstream 185239 13193145 ~ 13241855 (+)
LOC110507612 NA coding downstream 317031 13324937 ~ 13330676 (+)
LOC110507631 LOC106574283 coding downstream 375282 13383188 ~ 13387921 (+)
LOC110517609 sbp1 coding downstream 566591 13574497 ~ 13582605 (+)
G114330 NA non-coding upstream 19054 12988425 ~ 12988629 (+)
G114320 NA non-coding upstream 37844 12944196 ~ 12969839 (+)
G114322 NA non-coding upstream 53626 12951797 ~ 12954057 (+)
G114319 NA non-coding upstream 69647 12937573 ~ 12938036 (+)
G114286 LOC106591903 non-coding upstream 82410 12924472 ~ 12925273 (+)
G114537 LOC106606051 non-coding downstream 82171 13090077 ~ 13090488 (+)
G114553 NA non-coding downstream 114018 13121924 ~ 13122191 (+)
G114554 NA non-coding downstream 115603 13123509 ~ 13123745 (+)
G114598 NA non-coding downstream 129493 13137399 ~ 13137614 (+)
G114603 NA non-coding downstream 158458 13166364 ~ 13166592 (+)
G114323 NA other upstream 42753 12949360 ~ 12964930 (+)
G114263 NA other upstream 244856 12762232 ~ 12762827 (+)
G114244 NA other upstream 286368 12720730 ~ 12721315 (+)
G114243 NA other upstream 286990 12720408 ~ 12720693 (+)
G113396 NA other upstream 1297906 11708603 ~ 11709777 (+)
LOC110520769 LOC106593286 other downstream 614071 13604304 ~ 13623972 (+)
LOC110520780 LOC106574729 other downstream 693704 13663839 ~ 13756558 (+)
LOC110535330 LOC106574784 other downstream 953355 13961020 ~ 13976561 (+)
G115190 NA other downstream 1133976 14141882 ~ 14144267 (+)
G115189 NA other downstream 1226608 14234514 ~ 14236854 (+)

Expression


Co-expression Network