G114609


Basic Information

Item Value
gene id G114609
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13174245 ~ 13174505 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131540
ttcatgaggtagttacttggaatgcatttctattaacaggtgtaccttgttaaaagttactttgtggaatttctttccttcttaatgcgtttgagcctatcagttgtgctgtgacaaggtaggggtggtatacagaagatagccctatttggtaaaagaccaggtccatattatggcaagaacagctcaaataagcaaagagaatgaTTGTATTGTCACagaggtgcagtgaaatgtgttgattTACAggatcagccatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131540 True 261 lncRNA 0.48 1 13174245 13174505

Neighbor

gene id symbol gene type direction distance location
LOC110507515 LOC106575761 coding upstream 112939 13046879 ~ 13061306 (+)
LOC118937726 NA coding upstream 246543 12926821 ~ 12927702 (+)
LOC110525149 LOC106589684 coding upstream 257447 12913631 ~ 12916798 (+)
spag1b LOC106592835 coding upstream 397413 12716574 ~ 12776832 (+)
LOC110510520 rida coding upstream 494095 12674085 ~ 12680150 (+)
LOC118936508 ano10 coding downstream 18640 13193145 ~ 13241855 (+)
LOC110507612 NA coding downstream 150432 13324937 ~ 13330676 (+)
LOC110507631 LOC106574283 coding downstream 208683 13383188 ~ 13387921 (+)
LOC110517609 sbp1 coding downstream 399992 13574497 ~ 13582605 (+)
LOC110507693 LOC106574548 coding downstream 409619 13584124 ~ 13604148 (+)
G114603 NA non-coding upstream 7653 13166364 ~ 13166592 (+)
G114598 NA non-coding upstream 36631 13137399 ~ 13137614 (+)
G114554 NA non-coding upstream 50500 13123509 ~ 13123745 (+)
G114553 NA non-coding upstream 52054 13121924 ~ 13122191 (+)
G114537 LOC106606051 non-coding upstream 83757 13090077 ~ 13090488 (+)
G114611 NA non-coding downstream 1339 13175844 ~ 13176085 (+)
G114617 NA non-coding downstream 11573 13186078 ~ 13186773 (+)
G114620 NA non-coding downstream 15570 13190075 ~ 13190306 (+)
G114643 NA non-coding downstream 72257 13246762 ~ 13248211 (+)
G114648 NA non-coding downstream 84853 13259358 ~ 13259645 (+)
G114323 NA other upstream 209315 12949360 ~ 12964930 (+)
G114263 NA other upstream 411418 12762232 ~ 12762827 (+)
G114244 NA other upstream 452930 12720730 ~ 12721315 (+)
G114243 NA other upstream 453552 12720408 ~ 12720693 (+)
G113396 NA other upstream 1464468 11708603 ~ 11709777 (+)
LOC110520769 LOC106593286 other downstream 447472 13604304 ~ 13623972 (+)
LOC110520780 LOC106574729 other downstream 527105 13663839 ~ 13756558 (+)
LOC110535330 LOC106574784 other downstream 786756 13961020 ~ 13976561 (+)
G115190 NA other downstream 967377 14141882 ~ 14144267 (+)
G115189 NA other downstream 1060009 14234514 ~ 14236854 (+)

Expression


Co-expression Network