G114620


Basic Information

Item Value
gene id G114620
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13190075 ~ 13190306 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131556
ggaaatatgtttaTCTAACATtatcatacatttggcaggagggtaggaagtgcagctcaattTCCACCTCATTTAATGGGCAGTGTGCACCTAGCctatcttctcttgagagccaggtctgccttcagcagcatttctcaatagcaaggctatgctcactgagtctgcacATAGTCAAacctttccttaattttgggtcagtcatggtagccaggtattctgccactgtgta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131556 True 232 lncRNA 0.44 1 13190075 13190306

Neighbor

gene id symbol gene type direction distance location
LOC110507515 LOC106575761 coding upstream 128769 13046879 ~ 13061306 (+)
LOC118937726 NA coding upstream 262373 12926821 ~ 12927702 (+)
LOC110525149 LOC106589684 coding upstream 273277 12913631 ~ 12916798 (+)
spag1b LOC106592835 coding upstream 413243 12716574 ~ 12776832 (+)
LOC110510520 rida coding upstream 509925 12674085 ~ 12680150 (+)
LOC118936508 ano10 coding downstream 2839 13193145 ~ 13241855 (+)
LOC110507612 NA coding downstream 134631 13324937 ~ 13330676 (+)
LOC110507631 LOC106574283 coding downstream 192882 13383188 ~ 13387921 (+)
LOC110517609 sbp1 coding downstream 384191 13574497 ~ 13582605 (+)
LOC110507693 LOC106574548 coding downstream 393818 13584124 ~ 13604148 (+)
G114617 NA non-coding upstream 3302 13186078 ~ 13186773 (+)
G114611 NA non-coding upstream 13990 13175844 ~ 13176085 (+)
G114609 NA non-coding upstream 15570 13174245 ~ 13174505 (+)
G114603 NA non-coding upstream 23483 13166364 ~ 13166592 (+)
G114598 NA non-coding upstream 52461 13137399 ~ 13137614 (+)
G114643 NA non-coding downstream 56456 13246762 ~ 13248211 (+)
G114648 NA non-coding downstream 69052 13259358 ~ 13259645 (+)
G114652 NA non-coding downstream 75022 13265328 ~ 13265607 (+)
G114653 NA non-coding downstream 75852 13266158 ~ 13266370 (+)
G114655 NA non-coding downstream 77038 13267344 ~ 13267562 (+)
G114323 NA other upstream 225145 12949360 ~ 12964930 (+)
G114263 NA other upstream 427248 12762232 ~ 12762827 (+)
G114244 NA other upstream 468760 12720730 ~ 12721315 (+)
G114243 NA other upstream 469382 12720408 ~ 12720693 (+)
G113396 NA other upstream 1480298 11708603 ~ 11709777 (+)
LOC110520769 LOC106593286 other downstream 431671 13604304 ~ 13623972 (+)
LOC110520780 LOC106574729 other downstream 511304 13663839 ~ 13756558 (+)
LOC110535330 LOC106574784 other downstream 770955 13961020 ~ 13976561 (+)
G115190 NA other downstream 951576 14141882 ~ 14144267 (+)
G115189 NA other downstream 1044208 14234514 ~ 14236854 (+)

Expression


Co-expression Network