Gene
RNA
| Item | Value |
|---|---|
| gene id | G114653 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 13266158 ~ 13266370 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106580886, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU131596 | True | 213 | lncRNA | 0.41 | 1 | 13266158 | 13266370 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936508 | ano10 | coding | upstream | 24303 | 13193145 ~ 13241855 (+) |
| LOC110507515 | LOC106575761 | coding | upstream | 204852 | 13046879 ~ 13061306 (+) |
| LOC118937726 | NA | coding | upstream | 338456 | 12926821 ~ 12927702 (+) |
| LOC110525149 | LOC106589684 | coding | upstream | 349360 | 12913631 ~ 12916798 (+) |
| spag1b | LOC106592835 | coding | upstream | 489326 | 12716574 ~ 12776832 (+) |
| LOC110507612 | NA | coding | downstream | 58567 | 13324937 ~ 13330676 (+) |
| LOC110507631 | LOC106574283 | coding | downstream | 116818 | 13383188 ~ 13387921 (+) |
| LOC110517609 | sbp1 | coding | downstream | 308127 | 13574497 ~ 13582605 (+) |
| LOC110507693 | LOC106574548 | coding | downstream | 317754 | 13584124 ~ 13604148 (+) |
| LOC110520769 | LOC106593286 | coding | downstream | 337934 | 13604304 ~ 13623972 (+) |
| G114652 | NA | non-coding | upstream | 551 | 13265328 ~ 13265607 (+) |
| G114648 | NA | non-coding | upstream | 6513 | 13259358 ~ 13259645 (+) |
| G114643 | NA | non-coding | upstream | 17947 | 13246762 ~ 13248211 (+) |
| G114620 | NA | non-coding | upstream | 75852 | 13190075 ~ 13190306 (+) |
| G114617 | NA | non-coding | upstream | 79385 | 13186078 ~ 13186773 (+) |
| G114655 | NA | non-coding | downstream | 974 | 13267344 ~ 13267562 (+) |
| G114656 | NA | non-coding | downstream | 36677 | 13303047 ~ 13304633 (+) |
| G114687 | NA | non-coding | downstream | 64388 | 13330758 ~ 13332453 (+) |
| G114689 | LOC106606048 | non-coding | downstream | 72594 | 13338964 ~ 13344183 (+) |
| G114323 | NA | other | upstream | 301228 | 12949360 ~ 12964930 (+) |
| G114263 | NA | other | upstream | 503331 | 12762232 ~ 12762827 (+) |
| G114244 | NA | other | upstream | 544843 | 12720730 ~ 12721315 (+) |
| G114243 | NA | other | upstream | 545465 | 12720408 ~ 12720693 (+) |
| G113396 | NA | other | upstream | 1556381 | 11708603 ~ 11709777 (+) |
| LOC110520780 | LOC106574729 | other | downstream | 435240 | 13663839 ~ 13756558 (+) |
| LOC110535330 | LOC106574784 | other | downstream | 694891 | 13961020 ~ 13976561 (+) |
| G115190 | NA | other | downstream | 875512 | 14141882 ~ 14144267 (+) |
| G115189 | NA | other | downstream | 968144 | 14234514 ~ 14236854 (+) |
