G114656


Basic Information

Item Value
gene id G114656
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13303047 ~ 13304633 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131599
ggggctaattttcatcataggtacacttcaactatgacagacaaaatgagaagaaaaaaaatccagaaagtcacattgtaggatttttaatgaatttatttgccaccatttgcaagtaaattcattaaaaatcctacaatgtgattttctggaattttttttctaattttgtctgtcatagttgaagtgtacctatgatgaaaattacctgcctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtgtgtgtgtgtgtatatgtatatgtgtgtgtgtgtgtgtatgtatatgtgtgtgtgtgtgtgtatatgtgtgtgtgtgtgtgtatgtatatgtgtgtgtgtgtatatgtatatgtgtgtgtgtgtgta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131599 True 407 lncRNA 0.34 2 13303047 13304633

Neighbor

gene id symbol gene type direction distance location
LOC118936508 ano10 coding upstream 61192 13193145 ~ 13241855 (+)
LOC110507515 LOC106575761 coding upstream 241741 13046879 ~ 13061306 (+)
LOC118937726 NA coding upstream 375345 12926821 ~ 12927702 (+)
LOC110525149 LOC106589684 coding upstream 386249 12913631 ~ 12916798 (+)
spag1b LOC106592835 coding upstream 526215 12716574 ~ 12776832 (+)
LOC110507612 NA coding downstream 20304 13324937 ~ 13330676 (+)
LOC110507631 LOC106574283 coding downstream 78555 13383188 ~ 13387921 (+)
LOC110517609 sbp1 coding downstream 269864 13574497 ~ 13582605 (+)
LOC110507693 LOC106574548 coding downstream 279491 13584124 ~ 13604148 (+)
LOC110520769 LOC106593286 coding downstream 299671 13604304 ~ 13623972 (+)
G114655 NA non-coding upstream 35485 13267344 ~ 13267562 (+)
G114653 NA non-coding upstream 36677 13266158 ~ 13266370 (+)
G114652 NA non-coding upstream 37440 13265328 ~ 13265607 (+)
G114648 NA non-coding upstream 43402 13259358 ~ 13259645 (+)
G114643 NA non-coding upstream 54836 13246762 ~ 13248211 (+)
G114687 NA non-coding downstream 26125 13330758 ~ 13332453 (+)
G114689 LOC106606048 non-coding downstream 34331 13338964 ~ 13344183 (+)
G114712 NA non-coding downstream 125068 13429701 ~ 13431706 (+)
G114717 NA non-coding downstream 137221 13441854 ~ 13473747 (+)
G114323 NA other upstream 338117 12949360 ~ 12964930 (+)
G114263 NA other upstream 540220 12762232 ~ 12762827 (+)
G114244 NA other upstream 581732 12720730 ~ 12721315 (+)
G114243 NA other upstream 582354 12720408 ~ 12720693 (+)
G113396 NA other upstream 1593270 11708603 ~ 11709777 (+)
LOC110520780 LOC106574729 other downstream 396977 13663839 ~ 13756558 (+)
LOC110535330 LOC106574784 other downstream 656628 13961020 ~ 13976561 (+)
G115190 NA other downstream 837249 14141882 ~ 14144267 (+)
G115189 NA other downstream 929881 14234514 ~ 14236854 (+)

Expression


Co-expression Network