G114812


Basic Information

Item Value
gene id G114812
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13330748 ~ 13332506 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131788
AAGAAGCTAAACTCAGATGACTAAATCAACCCAGGGGTTTCTGTTTAGCACCTTGGACAGCACCTTCCACTACAAGCGCAGTACATAGGTTATCTGCCTCTCTCTTGACCGAACAGTAGATTATCCGTTCCGCCTAGCCCTAGGTGGAAAACACAACAATTAGAAACAGACATGGCAAAATCAGCAGCTATCTTGCTGGTGTTCATTTCCTTTTTGTACATCCTATCTCAATCAGACCATGTGGTTGCAGGATGGACAGACGAAAGGCTACCAAAGGCTGAAGTTATAGAGGACTCTAGGGAACTGcTGGGTGTCCTTCATAACGTCCTGGAGAAACTCCAAAACAGAAGAATGGCTGTGTGGGAAAGAAGACAAAGCCACCTTCCTAGTTGTATTGTCGGTGACTACTGCACAGTGAAAAAGGGACCACGGTACGGCCAACTATGTGACTGTCCAAGAGGATCAAAGTGCAACCTCTTCTTCCTCAAgtgtttgtgatttatttttgTTATGGTATTAGTTCATTTATTTCTGTCTGAAATATAGTAGGATTTTGAAATTTCGCTTCGCTACCTTCTAATATACATCCTTCTTCTGACCTGTTCCAGCCATGTGTTCTTTAATTTGCCTCTCATTCTACCATTCTGGTTGTTGTGCATTCAGCACAGATATGAAGGTAAGCTCTGTAAATATGAAAAAGAGAGGctcttttttaaataaaaatgttgattAATAAA
>TU131789
AGGAGTTTACCTTTGGGAAATCCATGCAATCCAATTAACTCAAACAACTAAGACACAGAATGAAAACAAACATGTTGTCCTCGCATCTTCCTCATGACCATGTGGTTGCAGGATGGACAGACGAAAGGCTACCAAAGGCTGAAGTTATAGAGGACTCTAGGGAACTGcTGGGTGTCCTTCATAACGTCCTGGAGAAACTCCAAAACAGAAGAATGGCTGTGTGGGAAAGAAGACAAAGCCACCTTCCTAGTTGTATTGTCGGTGACTACTGCACAGTGAAAAAGGGACCACGGTACGGCCAACTATGTGACTGTCCAAGAGGATCAAAGTGCAACCTCTTCTTCCTCAAgtgtttgtgatttatttttgTTATGGTATTAGTTCATTTATTTCTGTCTGAAATATAGTAGGATTTTGAAATTTCGCTTCGCTACCTTCTAATATACATCCTTCTTCTGACCTGTTCCAGCCATGTGTTCTTTAATTTGCCTCTCATTCTACCATTCTGGTTGTTGTGCATTCAGCACAGATATGAAGGTAAGCTCTGTAAATATGAAAAAGAGAGGctcttttttaaataaaaatgttgattAATAAA
>TU131790
AGGAGTTTACCTTTGGGAAATCCATGCAATCCAATTAACTCAAACAACTAAGACACAGAATGAAAACAAACATGTTGTCCTCGCATCTTCCTCATGGATGGACAGACGAAAGGCTACCAAAGGCTGAAGTTATAGAGGACTCTAGGGAACTGcTGGGTGTCCTTCATAACGTCCTGGAGAAACTCCAAAACAGAAGAATGGCTGTGTGGGAAAGAAGACAAAGCCACCTTCCTAGTGTAAGCAAGCTATTTCAGACACCACAGTGTATTGTCGGTGACTACTGCACAGTGAAAAAGGGACCACGGTACGGCCAACTATGTGACTGTCCAAGAGGATCAAAGTGCAACCTCTTCTTCCTCAAgtgtttgtgatttatttttgTTATGGTATTAGTTCATTTATTTCTGTCTGAAATATAGTAGGATTTTGAAATTTCGCTTCGCTACCTTCTAATATACATCCTTCTTCTGACCTGTTCCAGCCATGTGTTCTTTAATTTGCCTCTCATTCTACCATTCTGGTTGTTGTGCATTCAGCACAGATATGAAGGTAAGCTCTGTAAATATGAAAAAGAGAGGctcttttttaaataaaaatgttgattAATAAA

Function

NR:

description
PREDICTED: cocaine- and amphetamine-regulated transcript protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131788 False 737 TUCP 0.41 3 13330748 13332309
TU131789 False 598 TUCP 0.40 4 13330748 13332506
TU131790 True 610 TUCP 0.40 4 13330748 13332506

Neighbor

gene id symbol gene type direction distance location
LOC110513400 snrk coding downstream 6068 13250306 ~ 13324680 (-)
LOC118937736 NA coding downstream 11595 13316759 ~ 13319153 (-)
LOC118937744 NA coding downstream 80504 13246956 ~ 13250244 (-)
abhd5a LOC106573494 coding downstream 141736 13176165 ~ 13189012 (-)
LOC118937728 NA coding downstream 203621 13097545 ~ 13127127 (-)
LOC110507671 LOC106606048 coding upstream 7059 13339565 ~ 13353635 (-)
LOC118937745 LOC106606096 coding upstream 73376 13304688 ~ 13453664 (-)
LOC110534058 LOC106593045 coding upstream 164093 13494448 ~ 13500298 (-)
LOC118937746 NA coding upstream 281119 13613625 ~ 13614107 (-)
LOC118937748 LOC106574107 coding upstream 318300 13650726 ~ 13661631 (-)
G114814 NA non-coding downstream 271 13329535 ~ 13330477 (-)
G114790 NA non-coding downstream 69362 13260705 ~ 13261386 (-)
G114780 NA non-coding downstream 88914 13238974 ~ 13241834 (-)
G114763 NA non-coding downstream 125041 13205490 ~ 13205707 (-)
G114865 NA non-coding upstream 148010 13480516 ~ 13480903 (-)
G114867 NA non-coding upstream 161304 13493810 ~ 13494259 (-)
G114911 NA non-coding upstream 172128 13504634 ~ 13512209 (-)
G114912 NA non-coding upstream 172504 13505010 ~ 13558642 (-)
LOC110507534 LOC106606051 other downstream 236983 13086169 ~ 13094428 (-)
G114442 NA other downstream 591591 12735314 ~ 12739157 (-)
G114424 NA other downstream 621433 12707827 ~ 12709315 (-)
G114402 NA other downstream 717068 12610669 ~ 12613680 (-)
G114928 LOC106574568 other upstream 242029 13574535 ~ 13582606 (-)
G115431 LOC106574784 other upstream 629679 13962185 ~ 13976561 (-)
LOC110535427 LOC106585544 other upstream 725036 14046340 ~ 14080800 (-)

Expression


Co-expression Network