G114928 (LOC106574568)


Basic Information

Item Value
gene id G114928
gene name LOC106574568
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13574535 ~ 13582606 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131946
GTTACTCTATGAATTCCATATGTtagaatttgtttatttttttaaaacctcAGTTTCACCACTGGCATTGGAAGTAACAAAGAACATTTGGTTCATAGATGAGATAATGACTTAAGGCACAATTATGCATTTAAAGCAAAGCAGCATGGAATGAATAGGCACCATTATCGGGCATGAGAATGAATAGGCAGCATTATCGGGCATGAGGCTCGAGGGTATGCCTCCTTCCCCACCCGTTCCCAACTAATATGAGTTACATGAAGTCTATGTAAAGTATGATGGGAATGAGAGGGGGAAAACTAGGGCCTCCTGCGTAACTTTACAGCCAGATGTCAGAGGTGCAGTCTCCCCCAGGGTATCGTAGCTCGTGGGCCAAGGCCGGGCCATTGGGCTCTTTCCCAAAGTCGACCAGGAAGTTCTCATTCACCTTGAGGCCACCATTGGCTGTGTTCACGTCAATCTGCATCATAACAGAACCCTCCTTGATCATTTCCGGGTAGAACTGCTTGTCCCAGccactgtagagagaggtggtgacgTACAGTCTCTTCCCATCCAGACTGAGCTGCAACATCTGGGGGCTCCCTGGGATCCTCTTCCCCTTGATTGTGCGTGGGGGTGGTTGGCTCTGATTCTCTGGGTCCTCCAGTACTTTGACAGGGCCATCGTTTAGGATGCTCCCTCCCAAGAAGAGCTGGCCAGCCAGACGTGGGTTCCTCCTGTTTGTGATGTCATACTGTCGTATGTCTCCATGCAGCCAGTTACTGAAGTATAGGAAGCGGTCGTCCAGGGAGATCAGAATATCTGTGATCAGACttggcATCACTGGCAAAGCCCATCCCTCCACTTTCTTACTGGGGACGTGGATAACCTTCTCAGCAGCCCATTCTCCTTTTGGTGTCCTGTAGAAACGGAAGACTGTTCCTTGGAGTGCACAGCCGACGTAGCCCTCCGTGGCGGCGGGATCATGGAGGAAGCGGATCTCCAGAGGAATGGCGCCCTCCTCCCCCAGGTCCAGGGACTGTAGCCGCTTGTGAGTGGTCCAGTCCCACACGTGGATCTTCGATCCATAGAGACCTTCTTTGACATGTTCCAGGCTGAAACCGTAGGCGAGGGCTTTGGGCGCTCCCCATTCGGTGCTCATCATGACGTTGTGTCGGGGCTGGTACCAGAAGTCATAACCAAAAGGTGCCGCCTCACCAGGCAGCTCCCAGTTACCAACCACCTCGAACGTTTTACCATCCAGCAAGATAAAGCCACCTTTTCCATTGCCAGATGGATCTCCTATGCTGCTGATCATAATCTGGCCACTGCCCAGGCAGTGTGTGGTGTGGGGGTTGGCCAGGCCCGTCTTCCAGAAGATATCTGTGGGCTCCACAATCTTGTGCATCTGTGGAGCGCGGGGGTCTGTCCCAGTGTCCACTATGTAGACCCGGGAGGAGATGAGCGAGGGCAGGATAAGTCGGTTGCGCTTCTTGGATGAGTCGCCAAAACAGCTGCTGCAGGCGTTCCAACCAGAGTGGTGTAGCTCGTCATTCAGGTTGGGCATGGGCAGTCTGTGGATGACCTGTAGGCGCAGACATTACCAGGTCACTCTTTAATCCACAAGGTCAAAGGTCATGTATAATACTGTCATCTCTTCAGTATTTAAACTACCGACCACTGTGACTAATGAAGACAGGTGTGAAATCAAAAGCAAGGCAGTGGTTGTTTGATGTAGATCAGCAGTACCTGACAATAAGTAGGAGACTTGGGGTCCACGTCGACAGTGGCAAGGTAGTCTGGTTTTTGGATTCCAGTGTTGCGATAAATGCAGGGCAGGTACACAATCTCCTCACGTGGACCTTCAAAAACAAGAGCCCCATTTCAGGAGGCACTACTGTCATTCACTCTTCCTTGACCACAAGAACAAGGAAAATAATCAAACCACAAAGAATTCCAGTAGCCTACAACTGATGTCTGGTTCCTCCCAATGTTTCAGTAAAATACAGACAATTTATGGCATTTGTTTATGTAAATATTTTTCATGCAACTGACAAACTCAAGGAAccattaaaaatgttttttaaactaATAGTCCCAACTTGTCCAATGGGCAAGTGCCCTGTAGACCTTAATGTCAATCCCTCCTAAAACACATGGGGTGAGCTAAGCTTGTCTTTCCCAGAAAATGACACTCACCCTTCATGGCATCCAGTGGGCTTTTGTAGCCAGGTCCACAGCCTGTGCATTTagttgcttaaaaaaaaaaaaaaaaaaacagcaactgTCTTTTTCATAGAGAGCTCAAAATAACTTTACTACCACACACAGCAATCTCTGTGTTTACTATTACTGCTGAACATCTATGGCAGGTAACCACAGAACTGTCACACCTATAAGTCATATGCATTCGTCATACAGTTGTTGGGCATATGTTTAAAATGACCTAGAAGTTTAATCACAGGTAAGTCAAGTAGACACACTTTTCatactttttttgttgtaaaactgttgcagaatgtgtgtgtgaaagGAGACATTCATTTGTCCACTTTGTCTTCCTTTCCCAAGGATGCTGTTACTGGCAGCCATCAGAATCGTAGATAAATGCACTTTTACTGTAAAAATCTAATGCAATGTCATGATTGTGAATGTTAGAGAACAAATCAAATCTGCACAACATGGACCCAAAAATGCACTGTTTATTTACCCAGCCAATGTTTGACCCTAGggtcaaaataaataaacagagcACTGTTGAGTATATCAGTGTGCAGATTCTGTTCATTAATACATCAGAATCATAATATTATATATCAAGGTCATACAGATATGTACAGATAAACAGTGGTAACTATTTTTTAGGCCAATTGTGTGTGTAATATTTAaccaaaagaaaaagaaaaaaacagaCATTCCCACTACGGTGCCAACACCCCACTGAGAGTTCCTGCTCCCCAATCATATGTCTTGATTTACAGAATAATAGCAATCCACTCAAGTCAACAGTGCAGATATGGATTCACAAGAGACTGACAGGGTTGGGTCAGTGAGCatgattttttttccccccccacctttatttaaccaggtaggctagttgagaacaagttctcatttacaactgcgacctggccaagataaagcatagcagtgtgaacagacaacagagttacacatggagtaaacaattaacaagtcaataacacagtaggaaaaaaaagggggggaaaaaaaagagtctatatacattgtgtgcaaaaggcatgaggaggtaggtgaataattacaatttagcagattaacactggagtgataaatgatcagatggtcatgtaaaggtagagatactggtgtgcaaaagagcagaaaagtaaataaataaacagtatggggatgaggtaggtaaattggatgggctatttacccatagactatgtacagctgcagcgatcggttagctgctcagatagcagatgtttgaagttggtgagggagataagtctccaacttcagcgatttttgcaatacgttccagtcacaggcagcagagaactggaacgaaaggcagccaaatgaggtgttggctttagggatgatcagtgagatacacctgctggagcgcgtgctacgggtgggtgttgccatcgtgaccagtgaactgagatcaggtagagctttacctagcatggacttgtagatgacctggggccagtgggtctggcgacgaatatgtagcgagggccagccgactagagcatacaggtcgcagtggtgggtggtataaggtgctttagtaacaaaacggatggcactgtgatatactgcatccagtttgccgaGTACAGAACAGTGGTTAAAGCCCATCTCAGGGTCCTAAACTCTTATGGTGACTGGGTCTAGACAACAATGGTTCAGAGACTGTATAGATTTCAGATAAGCTTCATTAGCATGAATGGTAAGGCTACTGTTGCTAAAGCAAAGtgtgttgtaactttaatgtgttacagagttaatgtttaagtttattctttgagctgtatctaaagatatttctttagatttatttgcatatgtaattgtattgggttgtgttgaattacgctttttgactgcaagtcccagaatgctttgcgagaggaatgagagaacgcgccaattatgtgcaggtgcagtggattgtggctgactttccgatagcatcttacctgcattgctctgtaccaaaacaattgttgttaaatgtaacgtaaacaagtattcttactaaaataagctttcgtatcaaaaccgacgtcccgagtcattactaaGAAGTTAGTTAATCTAAAAGTGAGATAATGACATATCTATGTATATCTGTGGAACTTAGGACTCTGCTGATCCAGAGTGCTGGTTGTCTTTGGCATTGTACCAAATCCTGCCATAATTTAGTGCTGCCTTTACTTGGAATAAACCATTGCTTTTGTCATGATCAAAGCTGTGCCTTTTTCCTTACACATGACAAACAATGGTTTTGGCCTAAACCATTGTTGCAGCTGAGAAACAATAGTGAAGAAAAAAACATGGAGAAACCACAGCAGATGTCAGCTATCAAGCAATCTTCCAGGAAACTAGTCTCCAGTCCAACATTTCCCAACACAATTCCTTCTAAGATACACAAGCCCACAAGTTCAGCTTCCGTTCATTTAATGGGTTTGACTGTTGCAGGTCCAAAGAAACGTGGATGAGCCTCTTGCATCGTTGATGGATCTACCAAATTCTCTGTTATGAAAATAGGCTAGTCTAACTGTCAAAAGGACATTTTCATTTAATTGTAGAAATTAAAATGTAATAATGCATAGAAGGTTGTTTGTGGTTCTGCTGAAGCATCATGATAAAGTGGATCATTTAAGATGAACAAGGCAACAAGCACAAGAACAAGAAACCTTTCACACTAAACTCCAACCCCCACAATTTCCCGTCACTGCACACGAGAATAAACAGCTACTTACGCAATGTGAAGCAGGCAGTCTGGTGGCTACATCATttagaccagtgtttcccaaccaggggtactaggaacCACTGATTTAAACCACCAAACCTATGCAATTGTGTGACCAGGTGTTTAGGTCCATGCTGAAAACACTTTTTACTTTATTAATTCAAAATGGTGTGAGAAAGACAAAGTATCCTATAGTAAAACATAGCAAGCAGCTTAAGGGAAACATTACATGATTAAATCTAATTGAGACGTCGCTGTAACTTCCATTTCTTCCAGTCATTTTGCATTTCTAAAGGCAATGCACGAGTGCCaatatgtaaacacatttgtataCGTAATTGTCGGTTAAACTAACTGACTACTCAGCAATGGAATTCGGATTCACACATTTTCAACAAGAAATGCCGCACGGACGTGCGCAATTACTCACACTTATTTTCGTTTTGGACATATTTCATTAGTTGTCTTACTCAAATATGCATTTatataacacaataacacattcAGCTCTAAGTTAAATTACTAATGGAAAGTTGACACTATGGAGGTGGTTAGCATTATGTCCTAGTCCACGTTCAATCATTAACTTCGTCATTACCCATTTCAACGTGTTTTGACAGATTTCCTAAAAGCTACGAAAATGAGTGAAAAAGCATGAAGATTGGACAAACCCATCCCGCAGACTTTATTCGTCCAAGGTATCCACAAGGATCCGGGCTTTCTATAAATTATTTCAGCTGATATGAGAGTGGAGGAATGGTTGGGCAGGTTTTGTAGGGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131946 True 5749 TUCP 0.41 9 13574535 13582606

Neighbor

gene id symbol gene type direction distance location
LOC110534058 LOC106593045 coding downstream 74237 13494448 ~ 13500298 (-)
LOC118937745 LOC106606096 coding downstream 120871 13304688 ~ 13453664 (-)
LOC110507671 LOC106606048 coding downstream 220900 13339565 ~ 13353635 (-)
LOC110513400 snrk coding downstream 249855 13250306 ~ 13324680 (-)
LOC118937736 NA coding downstream 255382 13316759 ~ 13319153 (-)
LOC118937746 NA coding upstream 31019 13613625 ~ 13614107 (-)
LOC118937748 LOC106574107 coding upstream 68200 13650726 ~ 13661631 (-)
LOC110535394 LOC106574842 coding upstream 245673 13828279 ~ 13914376 (-)
LOC110534076 LOC106605869 coding upstream 343575 13926181 ~ 13935276 (-)
LOC110535382 ci023 coding upstream 353232 13935838 ~ 13937539 (-)
G114921 NA non-coding downstream 9816 13564063 ~ 13564719 (-)
G114920 NA non-coding downstream 11035 13562853 ~ 13563500 (-)
G114918 NA non-coding downstream 13279 13560923 ~ 13561256 (-)
G114916 NA non-coding downstream 15037 13559284 ~ 13559498 (-)
G114912 NA non-coding downstream 15893 13505010 ~ 13558642 (-)
G114951 NA non-coding upstream 41390 13623996 ~ 13624385 (-)
G114935 NA non-coding upstream 60271 13642877 ~ 13644538 (-)
G114963 NA non-coding upstream 79498 13662104 ~ 13662309 (-)
G114996 NA non-coding upstream 160190 13742796 ~ 13745127 (-)
G114812 NA other downstream 242029 13330748 ~ 13332506 (-)
LOC110507534 LOC106606051 other downstream 480770 13086169 ~ 13094428 (-)
G114442 NA other downstream 835378 12735314 ~ 12739157 (-)
G115431 LOC106574784 other upstream 379579 13962185 ~ 13976561 (-)
LOC110535427 LOC106585544 other upstream 474936 14046340 ~ 14080800 (-)
G115492 NA other upstream 641253 14126196 ~ 14224919 (-)
LOC110535605 LOC106574865 other upstream 827160 14408991 ~ 14418164 (-)

Expression


Co-expression Network