G114904


Basic Information

Item Value
gene id G114904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13718232 ~ 13718727 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131898
agttgaaactggagcagcagcacagtcaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcatggtcctagggctcaggtcctccgagagagagaaagagagaaggagagaattagagaacgcacacttagattcacacaggacaccgaataggacaggagaagtactccagatataacaaactgaccctagccccccgacacataaactactgcagcataaatactggaggctgagacaggaggggtcaggggacactgtggcccactccgaggacacccccggacagggccaaacaggaaggatataaccccacccactttgccaaag

Function

NR:

description
ZK1236.4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131898 True 345 lncRNA 0.54 2 13718232 13718727

Neighbor

gene id symbol gene type direction distance location
LOC110520770 LOC106606072 coding upstream 74337 13632935 ~ 13643895 (+)
LOC110513073 prune1 coding upstream 87653 13624633 ~ 13630579 (+)
LOC110520769 LOC106593286 coding upstream 94260 13604304 ~ 13623972 (+)
LOC110507693 LOC106574548 coding upstream 114084 13584124 ~ 13604148 (+)
LOC110517609 sbp1 coding upstream 135627 13574497 ~ 13582605 (+)
LOC118944102 LOC106574856 coding downstream 197011 13915738 ~ 13920541 (+)
LOC110535355 LOC106574818 coding downstream 202725 13921452 ~ 13927188 (+)
LOC110535330 LOC106574784 coding downstream 242293 13961020 ~ 13976561 (+)
LOC110534090 LOC106574714 coding downstream 309239 14027966 ~ 14043643 (+)
LOC110535435 LOC106585480 coding downstream 368292 14087019 ~ 14135046 (+)
G114897 NA non-coding upstream 33447 13683696 ~ 13684785 (+)
G114717 NA non-coding upstream 244485 13441854 ~ 13473747 (+)
G114712 NA non-coding upstream 286526 13429701 ~ 13431706 (+)
G114689 LOC106606048 non-coding upstream 374049 13338964 ~ 13344183 (+)
G114687 NA non-coding upstream 385779 13330758 ~ 13332453 (+)
G114990 NA non-coding downstream 16001 13734728 ~ 13734956 (+)
LOC110520780 LOC106574729 non-coding downstream 36197 13663839 ~ 13756558 (+)
G115009 NA non-coding downstream 43096 13761823 ~ 13762180 (+)
G115018 NA non-coding downstream 62198 13780925 ~ 13781127 (+)
G115036 NA non-coding downstream 82178 13800905 ~ 13801181 (+)
G114323 NA other upstream 753302 12949360 ~ 12964930 (+)
G114263 NA other upstream 955405 12762232 ~ 12762827 (+)
G114244 NA other upstream 996917 12720730 ~ 12721315 (+)
G115190 NA other downstream 423155 14141882 ~ 14144267 (+)
G115189 NA other downstream 515787 14234514 ~ 14236854 (+)
G115289 NA other downstream 687317 14406044 ~ 14407912 (+)
sec61b sc61b other downstream 837728 14556397 ~ 14565113 (+)

Expression


Co-expression Network