G114990


Basic Information

Item Value
gene id G114990
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13734728 ~ 13734956 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132023
CAGGGGGTCGATGGACTTGTCCTAATGGTAGCAGAGTAGTGAGAAACCAGGTTACAAGTGCTCTGCAGTGGTAATTGATGTAGCTGCAGCCTACCGATGTTAAGGATATTGATGTGTTTCCACACCGTGAACACACTCCTACATTAACTGTACTGGAAGGCCTGCGGTGGGCTGagagcatgtctggttggagcaTTGATCAGGTCTTTCACTGTGCTGCTGTTTACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132023 True 229 lncRNA 0.49 1 13734728 13734956

Neighbor

gene id symbol gene type direction distance location
LOC110520770 LOC106606072 coding upstream 90833 13632935 ~ 13643895 (+)
LOC110513073 prune1 coding upstream 104149 13624633 ~ 13630579 (+)
LOC110520769 LOC106593286 coding upstream 110756 13604304 ~ 13623972 (+)
LOC110507693 LOC106574548 coding upstream 130580 13584124 ~ 13604148 (+)
LOC110517609 sbp1 coding upstream 152123 13574497 ~ 13582605 (+)
LOC118944102 LOC106574856 coding downstream 180782 13915738 ~ 13920541 (+)
LOC110535355 LOC106574818 coding downstream 186496 13921452 ~ 13927188 (+)
LOC110535330 LOC106574784 coding downstream 226064 13961020 ~ 13976561 (+)
LOC110534090 LOC106574714 coding downstream 293010 14027966 ~ 14043643 (+)
LOC110535435 LOC106585480 coding downstream 352063 14087019 ~ 14135046 (+)
G114904 NA non-coding upstream 16001 13718232 ~ 13718727 (+)
G114897 NA non-coding upstream 49943 13683696 ~ 13684785 (+)
G114717 NA non-coding upstream 260981 13441854 ~ 13473747 (+)
G114712 NA non-coding upstream 303022 13429701 ~ 13431706 (+)
G114689 LOC106606048 non-coding upstream 390545 13338964 ~ 13344183 (+)
LOC110520780 LOC106574729 non-coding downstream 19968 13663839 ~ 13756558 (+)
G115009 NA non-coding downstream 26867 13761823 ~ 13762180 (+)
G115018 NA non-coding downstream 45969 13780925 ~ 13781127 (+)
G115036 NA non-coding downstream 65949 13800905 ~ 13801181 (+)
G115042 NA non-coding downstream 71448 13806404 ~ 13806741 (+)
G114323 NA other upstream 769798 12949360 ~ 12964930 (+)
G114263 NA other upstream 971901 12762232 ~ 12762827 (+)
G114244 NA other upstream 1013413 12720730 ~ 12721315 (+)
G115190 NA other downstream 406926 14141882 ~ 14144267 (+)
G115189 NA other downstream 499558 14234514 ~ 14236854 (+)
G115289 NA other downstream 671088 14406044 ~ 14407912 (+)
sec61b sc61b other downstream 821499 14556397 ~ 14565113 (+)

Expression


Co-expression Network