G115036


Basic Information

Item Value
gene id G115036
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13800905 ~ 13801181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132075
ATCTATCAATTTGTGCATTGCTGCTAAATTATTCAGTACAAttagtaattgcttgcttttctaaagtctaccaaccttaccagcaggcatgccagttaagatagttagacaagctagctactctaacttgattgatagcctgagatggcttcttggtagctagttatgaggttgggagattgggaacctgtctgggctagctaaagccaacttcataaaattgctaagTAGCTAGTAGTATTACGGGACGATTCTGACGGGGCACGTGCCCCTGTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132075 True 277 lncRNA 0.51 1 13800905 13801181

Neighbor

gene id symbol gene type direction distance location
LOC110520780 LOC106574729 coding upstream 44875 13663839 ~ 13756558 (+)
LOC110520770 LOC106606072 coding upstream 157010 13632935 ~ 13643895 (+)
LOC110513073 prune1 coding upstream 170326 13624633 ~ 13630579 (+)
LOC110520769 LOC106593286 coding upstream 176933 13604304 ~ 13623972 (+)
LOC110507693 LOC106574548 coding upstream 196757 13584124 ~ 13604148 (+)
LOC118944102 LOC106574856 coding downstream 114557 13915738 ~ 13920541 (+)
LOC110535355 LOC106574818 coding downstream 120271 13921452 ~ 13927188 (+)
LOC110535330 LOC106574784 coding downstream 159839 13961020 ~ 13976561 (+)
LOC110534090 LOC106574714 coding downstream 226785 14027966 ~ 14043643 (+)
LOC110535435 LOC106585480 coding downstream 285838 14087019 ~ 14135046 (+)
G115018 NA non-coding upstream 19778 13780925 ~ 13781127 (+)
G115009 NA non-coding upstream 38725 13761823 ~ 13762180 (+)
G114990 NA non-coding upstream 65949 13734728 ~ 13734956 (+)
G114904 NA non-coding upstream 82178 13718232 ~ 13718727 (+)
G115042 NA non-coding downstream 5223 13806404 ~ 13806741 (+)
G115044 NA non-coding downstream 6585 13807766 ~ 13807965 (+)
G115075 LOC106574723 non-coding downstream 104151 13905332 ~ 13932445 (+)
G115129 NA non-coding downstream 142121 13943302 ~ 13946788 (+)
G114323 NA other upstream 835975 12949360 ~ 12964930 (+)
G114263 NA other upstream 1038078 12762232 ~ 12762827 (+)
G114244 NA other upstream 1079590 12720730 ~ 12721315 (+)
G115190 NA other downstream 340701 14141882 ~ 14144267 (+)
G115189 NA other downstream 433333 14234514 ~ 14236854 (+)
G115289 NA other downstream 604863 14406044 ~ 14407912 (+)
sec61b sc61b other downstream 755274 14556397 ~ 14565113 (+)

Expression


Co-expression Network