G115042


Basic Information

Item Value
gene id G115042
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13806404 ~ 13806741 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132081
taatggaggtgtagattccatctcacattccggtgttcctaatggaggtgtagattccatctcacattccggtgttcctaatggaggtgtagattccatctcacattccggtgttcctaatggaggtgtagattccatctcatattccagtgttcctaatggaggtgtagattccatctcacattccggtgttcctaatggaggtgtagattccatctcacattccggtgttcctaatggaggggtagattccatctcacattccggtgttcctaatggaggtttAGATttcatctcacattccagtgttccaacttgtaaacaaggctgcatgggat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106607957

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132081 True 338 lncRNA 0.45 1 13806404 13806741

Neighbor

gene id symbol gene type direction distance location
LOC110520780 LOC106574729 coding upstream 50374 13663839 ~ 13756558 (+)
LOC110520770 LOC106606072 coding upstream 162509 13632935 ~ 13643895 (+)
LOC110513073 prune1 coding upstream 175825 13624633 ~ 13630579 (+)
LOC110520769 LOC106593286 coding upstream 182432 13604304 ~ 13623972 (+)
LOC110507693 LOC106574548 coding upstream 202256 13584124 ~ 13604148 (+)
LOC118944102 LOC106574856 coding downstream 108997 13915738 ~ 13920541 (+)
LOC110535355 LOC106574818 coding downstream 114711 13921452 ~ 13927188 (+)
LOC110535330 LOC106574784 coding downstream 154279 13961020 ~ 13976561 (+)
LOC110534090 LOC106574714 coding downstream 221225 14027966 ~ 14043643 (+)
LOC110535435 LOC106585480 coding downstream 280278 14087019 ~ 14135046 (+)
G115036 NA non-coding upstream 5223 13800905 ~ 13801181 (+)
G115018 NA non-coding upstream 25277 13780925 ~ 13781127 (+)
G115009 NA non-coding upstream 44224 13761823 ~ 13762180 (+)
G114990 NA non-coding upstream 71448 13734728 ~ 13734956 (+)
G115044 NA non-coding downstream 1025 13807766 ~ 13807965 (+)
G115075 LOC106574723 non-coding downstream 98591 13905332 ~ 13932445 (+)
G115129 NA non-coding downstream 136561 13943302 ~ 13946788 (+)
G115153 NA non-coding downstream 230499 14037240 ~ 14037747 (+)
G114323 NA other upstream 841474 12949360 ~ 12964930 (+)
G114263 NA other upstream 1043577 12762232 ~ 12762827 (+)
G114244 NA other upstream 1085089 12720730 ~ 12721315 (+)
G115190 NA other downstream 335141 14141882 ~ 14144267 (+)
G115189 NA other downstream 427773 14234514 ~ 14236854 (+)
G115289 NA other downstream 599303 14406044 ~ 14407912 (+)
sec61b sc61b other downstream 749714 14556397 ~ 14565113 (+)

Expression


Co-expression Network