G115155


Basic Information

Item Value
gene id G115155
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14051656 ~ 14161240 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132229
GCTTACCGTAGCAGATGACGCAATTTTTGATTCTTGTCAGCACAGCATTTTGGTCCTGTGACCTATCCACCAGCCGAACAAGGATGAAGCTGCCCGTGTCATCAGCCTGCgccacaacaaaacaaaaacatacatGGGCTGCATTTCAATTCACCAGCCTTTCCGCTGCCCTGTTCACTATCCCATAACCAGAAAGCATCTGTTAGCAATTGTACCTCAAAAGCCCGTTGAACATCGGGGGAGTTCCTCAGTGCGATGACAGCAGGAGCGATGTTCAAGGCCTTGAACTCCATGGCGGCCGTGACGATGGCAGCGCTGTCCACAGAGGGCCCGTTGGTGAAGAACACTGCCACCTTCCTCATCGTCAACGCTTTACGGGTTCGCTTGAAGACATGGCGCCCCACAAAGCGCATGGCCTCCCCAAGATGGCGCTGGTTGGACGTTCGTTCCAGTGCAATGTTTTGGATGGCCTCCAACAACTCCGGCTTGCGTTGGTAGTCCTGGAATCGGATCAGGTACTTGGTGTTGGCACTATAGGATACCACGGCAACACGTGCACCCGTCGGGCAGTTGCTCTCGGCGATGGCAACGTCATCCAATATGGAGAGGAGAGCGGAGCGCATCCTCTCAAACGTGGCAGGCTCCACATCCTGTGACATATCCAGAGCAAAGACCAGCTCTGTGGGGTAGGCTGGGCACGCTGCCTGGCCTGggggatagagtgagagagggacagagagagacaaggggagaggaagggagagagggacagagagagaggatagaggaagggagagaggtacagagagagggagagagagggagagaggtacagagagagagagatggggagagggagag

Function

NR:

description
collagen alpha-6(VI) chain-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU132229 True 861 lncRNA 0.55 3 14051656 14161240

Neighbor

gene id symbol gene type direction distance location
LOC110534090 LOC106574714 coding upstream 8013 14027966 ~ 14043643 (+)
LOC110535330 LOC106574784 coding upstream 75095 13961020 ~ 13976561 (+)
LOC110535355 LOC106574818 coding upstream 125766 13921452 ~ 13927188 (+)
LOC118944102 LOC106574856 coding upstream 131115 13915738 ~ 13920541 (+)
LOC110520780 LOC106574729 coding upstream 295626 13663839 ~ 13756558 (+)
LOC110535510 slc4a7 coding downstream 78992 14240232 ~ 14316219 (+)
LOC110490457 LOC106605965 coding downstream 178250 14339490 ~ 14343217 (+)
LOC118936243 cklf7 coding downstream 183651 14344891 ~ 14356726 (+)
trnat-ugu NA coding downstream 247426 14408666 ~ 14408738 (+)
galnt1 galnt1 coding downstream 269661 14430901 ~ 14497781 (+)
G115153 NA non-coding upstream 13909 14037240 ~ 14037747 (+)
G115129 NA non-coding upstream 104868 13943302 ~ 13946788 (+)
G115075 LOC106574723 non-coding upstream 119211 13905332 ~ 13932445 (+)
G115044 NA non-coding upstream 243691 13807766 ~ 13807965 (+)
G115198 NA non-coding downstream 5424 14166664 ~ 14168403 (+)
G115216 LOC106585480 non-coding downstream 38013 14199253 ~ 14202942 (+)
G115252 NA non-coding downstream 131519 14292759 ~ 14297388 (+)
G115081 NA non-coding downstream 156308 14317548 ~ 14318010 (+)
G115262 NA non-coding downstream 173917 14335157 ~ 14335397 (+)
LOC110520769 LOC106593286 other upstream 427691 13604304 ~ 13623972 (+)
G114323 NA other upstream 1086726 12949360 ~ 12964930 (+)
G114263 NA other upstream 1288829 12762232 ~ 12762827 (+)
G115189 NA other downstream 73274 14234514 ~ 14236854 (+)
G115289 NA other downstream 244804 14406044 ~ 14407912 (+)
sec61b sc61b other downstream 395215 14556397 ~ 14565113 (+)
stx17 stx17 other downstream 592383 14753455 ~ 14775822 (+)
si:ch211-197h24.6 LOC106574428 other downstream 699480 14860649 ~ 14867713 (+)

Expression


Co-expression Network