G115190


Basic Information

Item Value
gene id G115190
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14141882 ~ 14144267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132281
GAGTGACTGTCACACATTGTGACTCTTGTGAAGAAGAACAGAAACAGCACAGCATGGCAGCCTTTGTCTCGTTGGCCACGTGTCACCACTGCAGCATATCTTCCAGACATGGCCTTGTCTACAGGGAGTACATGGCAGCTCTATCCAGGAACGTCATGGCTCCCAGTTACACCAGGAGGCATAGTTCACAGGCTAGAACCCTGCCACTGCGAGCTAGGGGAAGACTCATCACCCAAAGGCCTGTCGGAGAGGCCAAGAATCGGCCTAGAGCTCCAAGGCCCAATCCTCCAGAGTTCATTGCCATATCTTCCTCCAAGCTGGCCGGTGTGAAACATTTTGTATTTGTCCACCTAAGGAAGCTCTTTTCATTGGGTGACACCCAGAGGCGCAGAAAGAGTGGCCTGAAACTTTTCTCCTGAAGTATTGCAAATATAATTTGATGGTAAACATCAATGGGCTTGATGATCCACAAGGTGGCGCTCCAGTAATTCAGTAGGAAGAATCAGTGATAGAGGAGTCAGCAGGAAGATGCTCACTTGTCAAGGCTAAGACATGCAAGTACTCAGACCTCCCTCACCTGAGAGATTGAAGAATGGTGAATGCAGGCCTATACCTTTTGGCAAGAGTCTCTATGGCAACCAGTAGCCATGTGGGTGAGATGGTTCTGGGTGGAATACAAGGCTTTTGAGCTTTCTACATATTTACATATTTATTGTTCTGTTCTGAGGTATGATGTgtgttattttacctttatttaactaggcaagtcagttaagaacacattcttatcttcaatgacggcctgggttaactgcctgttcaggggcagaacgacagatttgtaccttgtcagctcgggggtttgaacttgcaaccttccggttactagtccaacacgctaaccactaggctaccctgccgtgcAAAATCAGACATACTATTTAATTTAGTCACATGGTACAACACTTGTATCAGTATCAACTTTTAATGTGATTAGGTTTTTGAAATATAATTGAAAGTCTGTAGAGTCATATGATATTGTTGCCTCCAGCTCAGGCCAAGAAGGAGCCATTGCATATCCTGTTTAACAGTAAGTTGTATTGGATCAAGTGTGAGCTTAATGACtatattattattgttgtcaAATGTTTAATGCAATGTTATAAACATGTACAGCAGTATAATATACTTGCTTGTTTAGAAATAATACACAGAAACTAATCTAA

Function

NR:

description
uncharacterized protein LOC110367242 isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU132281 True 1226 TUCP 0.43 3 14141882 14144267

Neighbor

gene id symbol gene type direction distance location
LOC110535435 LOC106585480 coding upstream 6836 14087019 ~ 14135046 (+)
LOC110534090 LOC106574714 coding upstream 98239 14027966 ~ 14043643 (+)
LOC110535330 LOC106574784 coding upstream 165321 13961020 ~ 13976561 (+)
LOC110535355 LOC106574818 coding upstream 215992 13921452 ~ 13927188 (+)
LOC118944102 LOC106574856 coding upstream 221341 13915738 ~ 13920541 (+)
LOC110535510 slc4a7 coding downstream 95965 14240232 ~ 14316219 (+)
LOC110490457 LOC106605965 coding downstream 195223 14339490 ~ 14343217 (+)
LOC118936243 cklf7 coding downstream 200624 14344891 ~ 14356726 (+)
trnat-ugu NA coding downstream 264399 14408666 ~ 14408738 (+)
galnt1 galnt1 coding downstream 286634 14430901 ~ 14497781 (+)
G115086 LOC106585480 non-coding upstream 22786 14108301 ~ 14119096 (+)
G115153 NA non-coding upstream 104135 14037240 ~ 14037747 (+)
G115129 NA non-coding upstream 195094 13943302 ~ 13946788 (+)
G115075 LOC106574723 non-coding upstream 209437 13905332 ~ 13932445 (+)
G115198 NA non-coding downstream 22397 14166664 ~ 14168403 (+)
G115216 LOC106585480 non-coding downstream 54986 14199253 ~ 14202942 (+)
G115252 NA non-coding downstream 148492 14292759 ~ 14297388 (+)
G115081 NA non-coding downstream 173281 14317548 ~ 14318010 (+)
G115262 NA non-coding downstream 190890 14335157 ~ 14335397 (+)
LOC110520780 LOC106574729 other upstream 432508 13663839 ~ 13756558 (+)
LOC110520769 LOC106593286 other upstream 517917 13604304 ~ 13623972 (+)
G114323 NA other upstream 1176952 12949360 ~ 12964930 (+)
G114263 NA other upstream 1379055 12762232 ~ 12762827 (+)
G115189 NA other downstream 90247 14234514 ~ 14236854 (+)
G115289 NA other downstream 261777 14406044 ~ 14407912 (+)
sec61b sc61b other downstream 412188 14556397 ~ 14565113 (+)
stx17 stx17 other downstream 609356 14753455 ~ 14775822 (+)
si:ch211-197h24.6 LOC106574428 other downstream 716453 14860649 ~ 14867713 (+)

Expression


Co-expression Network