G115561



Basic Information


Item Value
gene id G115561
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14324080 ~ 14324335 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU132752
GTGTATATTTGGGTGTCTCCAATTGAGCAAAATAGTTTTAGTGGCCCCCCTTTTGATGGCGGAGAGAAACATGTACgctttaaagcacatttcctgcaattcttccCATTTTACCATGGGGTGGAGATAAAATTGTTTTcaattttaaagctaatttcatgcaattctacacatttttccatgacttatgccatTTTAATGaaatctgagtgagagtgactaacaaaatcaatggtggTCAGGACCCCTGAGAATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU132752 True 256 lncRNA 0.38 1 14324080 14324335

Neighbor


gene id symbol gene type direction distance location
LOC110513641 NA coding downstream 32805 14290216 ~ 14291275 (-)
LOC110535417 LOC106585541 coding downstream 136819 14155666 ~ 14187261 (-)
LOC110535427 LOC106585544 coding downstream 243280 14046340 ~ 14080800 (-)
LOC110534084 LOC106574737 coding downstream 296202 13981286 ~ 14027878 (-)
LOC110535305 LOC106574784 coding downstream 363826 13957030 ~ 13960254 (-)
LOC110533643 LOC106605966 coding upstream 8416 14332751 ~ 14335014 (-)
LOC110490474 LOC106606103 coding upstream 41394 14365729 ~ 14374923 (-)
LOC110490494 LOC106586326 coding upstream 62398 14386733 ~ 14398249 (-)
LOC110490504 LOC106574261 coding upstream 74022 14398357 ~ 14405044 (-)
LOC110516895 LOC106574265 coding upstream 80060 14404395 ~ 14406810 (-)
G115557 LOC106585523 non-coding downstream 16938 14300171 ~ 14307142 (-)
G115490 NA non-coding downstream 100386 14125402 ~ 14223694 (-)
G115484 NA non-coding downstream 179663 14109507 ~ 14144417 (-)
G115492 NA non-coding downstream 196896 14126196 ~ 14224919 (-)
G115491 NA non-coding downstream 197241 14125617 ~ 14126839 (-)
G115564 NA non-coding upstream 12659 14336994 ~ 14337288 (-)
G115567 LOC106605965 non-coding upstream 15813 14340148 ~ 14340542 (-)
G115575 NA non-coding upstream 16312 14340647 ~ 14345292 (-)
G115568 NA non-coding upstream 38842 14363177 ~ 14364307 (-)
G115586 NA non-coding upstream 50758 14375093 ~ 14375324 (-)
G115431 LOC106574784 other downstream 347519 13962185 ~ 13976561 (-)
LOC118937748 LOC106574107 other downstream 662489 13650726 ~ 13661631 (-)
G114928 LOC106574568 other downstream 741474 13574535 ~ 13582606 (-)
LOC110535605 LOC106574865 other upstream 85431 14408991 ~ 14418164 (-)
tmem245 LOC106595499 other upstream 201733 14508116 ~ 14526558 (-)
alg2 alg2 other upstream 230924 14550685 ~ 14556207 (-)
G115601 sc61b other upstream 239468 14556423 ~ 14565399 (-)
G116014 NA other upstream 490944 14815279 ~ 14816661 (-)

Expression



Co-expression Network