G115083


Basic Information

Item Value
gene id G115083
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14364639 ~ 14366242 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132138
cccctccaaGTTACTtctgaaataaagaaaaacacataCAATTAAAATACATAAACTGCGATTGAAAAagcatttaaaaacattacagaTATAGTCAGTTAGTTTCATTGATTGCTATATTTAAAATGAATCTATATGGTATGAACACCAATAAGGAACGTGGAGTTGGCCTCATATAGAAATACTGGGGAGCTTGCTTGCATGGACTGAAATTTTAAAACCATAGAAATCAATGACTTGGGGATACTTGTGAGAAATAGGTCTAAAATAAAATGACAGACATAGGGGCCCATTAAAAAAGATATATCATATTTCTGTAAAAACGATTCTGGCATTACTGTTCCCTTTCCTTACTAAAGAGTTTGAATTTAATCATATTGTCATTCCTTAAACTGGCTAATAAATGATGTCGACTTTTAAAACGATTTCTTCCGGTTAAATAATGTAACTGTACTTGGGTTTGACTGTAAATAACTGGATAAATATTGTTCTTCAACTCCCAAACCATTTTTTAGAGAGAGATTAGATACAGCATTTTGCATAGCTGGAGCCATCTTGATAAGATGCAAGTACAGATAGGTGCTCATCCCAGTAACACTGAGAAATGCAGGAATGACAGTCAGTGGTAAGGCAATACAGTGATCTTAAAATCTCATAATAGTCTATTCcaggactctccaaccctgttcctggagagataccctcctgtaggttcactccaaccccgttcctggagagataccctcctgtaggttcacactccaaccctaatctaacacacctgattctaataattacaTGGTTATAAACTGAACCAgattagttacaactggggttggagtgaaaagcTACAGGAggatagatctccaggaacagggttggtgaaaacctacaggaggatagatctccaggaacagggttggagtgaaaacctacaggaggatagatctccaggaacagggttggtgaaaacctacaggaggatagatctccaggaacagggttggtgaaaacctacaggaggatagctctccaggaacagggttggagtaaaaAGCTACAGGAggatagatctccaggaacagggttggagtgaaaagcTACAGGAggatagatctccaggaacagggttggagagccttgGTCCATTTCTATCAATGAGTGGTCCCATTCCAAGCAGCTCCATGGTCCAAGGAAACAGAATGTATACAACACAGACCATGTCTCCTACAAAAATGGTCCCACTGCTAAGAATAAAAGCTCTGAATAAGCTGTTAAAACTACTGGAGATTCCTTTCCTTCCTTTAAGCAGATATAAGGTGGCCCTCTGATAGTCTTAGTGTGTTGCCTGTTTGCGTGTGTAAATGTGGGAGAAAGAGACACCAGTGTTACACTCGTTAGGTATCCCTGGGCCTAGTCTGCTTCGTTCTGTTCCCTGTTGAGTTTCTCGGCCTCTGCCACAGGGGCCCCACCGTTGCTTGCGGCTTGCTGGTTGGTCTTTTTAAAAGGAAAACCCCTGGTCTTCACAAACCAGCCAGCATCCACCAGGAATGCCACAGTGGC

Function

NR:

description
CKLF-like MARVEL transmembrane domain-containing protein 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132138 True 1563 lncRNA 0.42 2 14364639 14366242

Neighbor

gene id symbol gene type direction distance location
LOC118936243 cklf7 coding upstream 7913 14344891 ~ 14356726 (+)
LOC110490457 LOC106605965 coding upstream 21422 14339490 ~ 14343217 (+)
LOC110535510 slc4a7 coding upstream 48420 14240232 ~ 14316219 (+)
LOC110513267 LOC106606078 coding upstream 134437 14109544 ~ 14230202 (+)
LOC110535435 LOC106585480 coding upstream 229593 14087019 ~ 14135046 (+)
trnat-ugu NA coding downstream 42424 14408666 ~ 14408738 (+)
galnt1 galnt1 coding downstream 64659 14430901 ~ 14497781 (+)
sec61b sc61b coding downstream 190155 14556397 ~ 14565113 (+)
nr4a3 nr4a3 coding downstream 343680 14709922 ~ 14744937 (+)
stx17 stx17 coding downstream 387213 14753455 ~ 14775822 (+)
G115077 NA non-coding upstream 336 14363222 ~ 14364303 (+)
G115263 NA non-coding upstream 28684 14335711 ~ 14335955 (+)
G115262 NA non-coding upstream 29242 14335157 ~ 14335397 (+)
G115081 NA non-coding upstream 46629 14317548 ~ 14318010 (+)
G115252 NA non-coding upstream 67251 14292759 ~ 14297388 (+)
G115271 NA non-coding downstream 9379 14375621 ~ 14375857 (+)
G115274 NA non-coding downstream 15371 14381613 ~ 14381824 (+)
G115276 NA non-coding downstream 20868 14387110 ~ 14387543 (+)
G115286 NA non-coding downstream 37408 14403650 ~ 14404285 (+)
G115290 NA non-coding downstream 42805 14409047 ~ 14409701 (+)
G115189 NA other upstream 127785 14234514 ~ 14236854 (+)
G115190 NA other upstream 220372 14141882 ~ 14144267 (+)
LOC110535330 LOC106574784 other upstream 401827 13961020 ~ 13976561 (+)
LOC110520780 LOC106574729 other upstream 655265 13663839 ~ 13756558 (+)
LOC110520769 LOC106593286 other upstream 740674 13604304 ~ 13623972 (+)
G115289 NA other downstream 39802 14406044 ~ 14407912 (+)
si:ch211-197h24.6 LOC106574428 other downstream 494478 14860649 ~ 14867713 (+)
tmem67 LOC106606053 other downstream 511016 14870805 ~ 14882237 (+)

Expression


Co-expression Network