G115586



Basic Information


Item Value
gene id G115586
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14375093 ~ 14375324 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU132805
ACATTATTGTAGAATAGGCTACTCCTGTATCCAGACTATATTAGGATACCGTTAtttcattggccttgtcaggCATGATTTTAGGTTTTTGATCAAAGTTGTATGTTGTACCTCGTTTCCCTTCTTCAATGAAAAGTACTTATGCATTCCCCATTCAATTCAGTTTGAGTGTGAATGTGTAGGCCTAGTGTCAGTGGAAAAATAAACCCATAGCTCCAGCACAGAATGGCAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU132805 True 232 lncRNA 0.38 1 14375093 14375324

Neighbor


gene id symbol gene type direction distance location
LOC110490474 LOC106606103 coding downstream 170 14365729 ~ 14374923 (-)
LOC110533643 LOC106605966 coding downstream 40079 14332751 ~ 14335014 (-)
LOC110513641 NA coding downstream 83818 14290216 ~ 14291275 (-)
LOC110535417 LOC106585541 coding downstream 187832 14155666 ~ 14187261 (-)
LOC110535427 LOC106585544 coding downstream 294293 14046340 ~ 14080800 (-)
LOC110490494 LOC106586326 coding upstream 11409 14386733 ~ 14398249 (-)
LOC110490504 LOC106574261 coding upstream 23033 14398357 ~ 14405044 (-)
LOC110516895 LOC106574265 coding upstream 29071 14404395 ~ 14406810 (-)
LOC110535605 LOC106574865 coding upstream 33667 14408991 ~ 14418164 (-)
tmem245 LOC106595499 coding upstream 132792 14508116 ~ 14526558 (-)
G115568 NA non-coding downstream 10786 14363177 ~ 14364307 (-)
G115575 NA non-coding downstream 29801 14340647 ~ 14345292 (-)
G115567 LOC106605965 non-coding downstream 34551 14340148 ~ 14340542 (-)
G115564 NA non-coding downstream 37805 14336994 ~ 14337288 (-)
G115561 NA non-coding downstream 50758 14324080 ~ 14324335 (-)
G115590 NA non-coding upstream 4965 14380289 ~ 14380500 (-)
G115612 NA non-coding upstream 45460 14420784 ~ 14421033 (-)
G115606 NA non-coding upstream 67612 14442936 ~ 14499718 (-)
G115492 NA other downstream 150174 14126196 ~ 14224919 (-)
G115431 LOC106574784 other downstream 398532 13962185 ~ 13976561 (-)
LOC118937748 LOC106574107 other downstream 713502 13650726 ~ 13661631 (-)
G114928 LOC106574568 other downstream 792487 13574535 ~ 13582606 (-)
alg2 alg2 other upstream 179935 14550685 ~ 14556207 (-)
G115601 sc61b other upstream 188479 14556423 ~ 14565399 (-)
G116014 NA other upstream 439955 14815279 ~ 14816661 (-)

Expression



Co-expression Network