Gene
RNA
| Item | Value |
|---|---|
| gene id | G115331 |
| gene name | LOC106573619 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 14506661 ~ 14507500 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tripartite motif-containing protein 16-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU132454 | True | 840 | lncRNA | 0.46 | 1 | 14506661 | 14507500 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| galnt1 | galnt1 | coding | upstream | 8880 | 14430901 ~ 14497781 (+) |
| trnat-ugu | NA | coding | upstream | 97923 | 14408666 ~ 14408738 (+) |
| LOC118936243 | cklf7 | coding | upstream | 149935 | 14344891 ~ 14356726 (+) |
| LOC110490457 | LOC106605965 | coding | upstream | 163444 | 14339490 ~ 14343217 (+) |
| LOC110535510 | slc4a7 | coding | upstream | 190442 | 14240232 ~ 14316219 (+) |
| sec61b | sc61b | coding | downstream | 48897 | 14556397 ~ 14565113 (+) |
| nr4a3 | nr4a3 | coding | downstream | 202422 | 14709922 ~ 14744937 (+) |
| stx17 | stx17 | coding | downstream | 245955 | 14753455 ~ 14775822 (+) |
| LOC110535632 | invs | coding | downstream | 286702 | 14794202 ~ 14837595 (+) |
| si:ch211-197h24.6 | LOC106574428 | coding | downstream | 353149 | 14860649 ~ 14867713 (+) |
| G115330 | NA | non-coding | upstream | 1123 | 14504666 ~ 14505538 (+) |
| G115302 | NA | non-coding | upstream | 4091 | 14501822 ~ 14502570 (+) |
| G115327 | NA | non-coding | upstream | 14447 | 14490525 ~ 14492214 (+) |
| G115325 | NA | non-coding | upstream | 29632 | 14476540 ~ 14477029 (+) |
| G115322 | NA | non-coding | upstream | 34689 | 14471198 ~ 14471972 (+) |
| G115342 | LOC106595499 | non-coding | downstream | 18537 | 14526037 ~ 14526515 (+) |
| G115343 | NA | non-coding | downstream | 19323 | 14526823 ~ 14527193 (+) |
| G115344 | NA | non-coding | downstream | 25857 | 14533357 ~ 14533634 (+) |
| G115346 | NA | non-coding | downstream | 28141 | 14535641 ~ 14558097 (+) |
| G115361 | NA | non-coding | downstream | 70408 | 14577908 ~ 14578156 (+) |
| G115289 | NA | other | upstream | 98749 | 14406044 ~ 14407912 (+) |
| G115189 | NA | other | upstream | 269807 | 14234514 ~ 14236854 (+) |
| G115190 | NA | other | upstream | 362394 | 14141882 ~ 14144267 (+) |
| LOC110535330 | LOC106574784 | other | upstream | 543849 | 13961020 ~ 13976561 (+) |
| LOC110520780 | LOC106574729 | other | upstream | 797287 | 13663839 ~ 13756558 (+) |
| tmem67 | LOC106606053 | other | downstream | 369758 | 14870805 ~ 14882237 (+) |
| esrp1 | LOC106605950 | other | downstream | 498093 | 15005556 ~ 15026595 (+) |
