G115344


Basic Information

Item Value
gene id G115344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14533357 ~ 14533634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132473
GTAAACACAGATGCCAATTGAATAACACTATGAGGTAATGTAGGGATTTATACATTTATTATGCAGAAATGTCTGCTATGATAGGTTGGTTTCTTATTCCTTTGTGTGAATGTGAAAATATTCTAGAATCTACATTGCATGTTATTGTTGACAGCATTGATAACTCCCAAGGACTAAGGCCAAACTGCTGAAAAAAGCAGGACACACAATTCACCAGTGGTTACAACTGGCTTTACAAGGATTGTGATTCTCAAATCTCTCCGGTTCTTCTTCTCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132473 True 278 lncRNA 0.37 1 14533357 14533634

Neighbor

gene id symbol gene type direction distance location
galnt1 galnt1 coding upstream 35576 14430901 ~ 14497781 (+)
trnat-ugu NA coding upstream 124619 14408666 ~ 14408738 (+)
LOC118936243 cklf7 coding upstream 176631 14344891 ~ 14356726 (+)
LOC110490457 LOC106605965 coding upstream 190140 14339490 ~ 14343217 (+)
LOC110535510 slc4a7 coding upstream 217138 14240232 ~ 14316219 (+)
sec61b sc61b coding downstream 22763 14556397 ~ 14565113 (+)
nr4a3 nr4a3 coding downstream 176288 14709922 ~ 14744937 (+)
stx17 stx17 coding downstream 219821 14753455 ~ 14775822 (+)
LOC110535632 invs coding downstream 260568 14794202 ~ 14837595 (+)
si:ch211-197h24.6 LOC106574428 coding downstream 327015 14860649 ~ 14867713 (+)
G115343 NA non-coding upstream 6164 14526823 ~ 14527193 (+)
G115342 LOC106595499 non-coding upstream 6842 14526037 ~ 14526515 (+)
G115331 LOC106573619 non-coding upstream 25857 14506661 ~ 14507500 (+)
G115330 NA non-coding upstream 27819 14504666 ~ 14505538 (+)
G115302 NA non-coding upstream 30787 14501822 ~ 14502570 (+)
G115346 NA non-coding downstream 2007 14535641 ~ 14558097 (+)
G115361 NA non-coding downstream 44274 14577908 ~ 14578156 (+)
G115363 NA non-coding downstream 50815 14584449 ~ 14610652 (+)
G115362 NA non-coding downstream 51123 14584757 ~ 14585497 (+)
G115365 NA non-coding downstream 69612 14603246 ~ 14617366 (+)
G115289 NA other upstream 125445 14406044 ~ 14407912 (+)
G115189 NA other upstream 296503 14234514 ~ 14236854 (+)
G115190 NA other upstream 389090 14141882 ~ 14144267 (+)
LOC110535330 LOC106574784 other upstream 570545 13961020 ~ 13976561 (+)
LOC110520780 LOC106574729 other upstream 823983 13663839 ~ 13756558 (+)
tmem67 LOC106606053 other downstream 343624 14870805 ~ 14882237 (+)
esrp1 LOC106605950 other downstream 471959 15005556 ~ 15026595 (+)

Expression


Co-expression Network