G115365


Basic Information

Item Value
gene id G115365
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14603246 ~ 14617366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132500
tatggtaacatgtctctcccagtagtagtatggtaacatgtctctccaagcagtagtatggtaacatgtctctcctagcagtagtatggtaacatgtctctcctagcagtagtatggtaacatgtctctcctagcagtagtatggtaacatgtctctcccagcagtagtatggtaacatgtctctcctagcagtagtatggtaacatgtctctcccagtagtactatggtaacatgtctctcccagcagtactatggtaacatgtctctcccagtagtagtatggtaacatgtctctcctagcagtagtatggtaacatgtccctcccagcagtagtatggtaacatgtctctcccagtagtagtatggtaacatgtctctcccagcatgtctctcccagcagtagtatggtaccatgtctctcccagtaatagtatggtaacatgtccctcccagcagtactatggtaacatgtctctcccagcagtagtatggtaacatgtccctcccagcagtactatggtaacatgtctctcccagtaatagtatggtaacatgtatctcccagtagtagtatggtaacatgtctctccaagcagtagtatggtaacatgtctctcccagcagtagtatggtaacatgtctctcctagcagtagtatggtaacatgtctctcccagcagtagt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106609222

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132500 True 687 lncRNA 0.42 4 14603246 14617366

Neighbor

gene id symbol gene type direction distance location
sec61b sc61b coding upstream 38133 14556397 ~ 14565113 (+)
galnt1 galnt1 coding upstream 105465 14430901 ~ 14497781 (+)
trnat-ugu NA coding upstream 194508 14408666 ~ 14408738 (+)
LOC118936243 cklf7 coding upstream 246520 14344891 ~ 14356726 (+)
LOC110490457 LOC106605965 coding upstream 260029 14339490 ~ 14343217 (+)
nr4a3 nr4a3 coding downstream 92556 14709922 ~ 14744937 (+)
stx17 stx17 coding downstream 136089 14753455 ~ 14775822 (+)
LOC110535632 invs coding downstream 176836 14794202 ~ 14837595 (+)
si:ch211-197h24.6 LOC106574428 coding downstream 243283 14860649 ~ 14867713 (+)
tmem67 LOC106606053 coding downstream 253439 14870805 ~ 14882237 (+)
G115362 NA non-coding upstream 17749 14584757 ~ 14585497 (+)
G115361 NA non-coding upstream 25090 14577908 ~ 14578156 (+)
G115346 NA non-coding upstream 45149 14535641 ~ 14558097 (+)
G115344 NA non-coding upstream 69612 14533357 ~ 14533634 (+)
G115343 NA non-coding upstream 76053 14526823 ~ 14527193 (+)
G115371 NA non-coding downstream 21878 14639244 ~ 14639618 (+)
G115703 NA non-coding downstream 26359 14643725 ~ 14643930 (+)
G115720 NA non-coding downstream 59912 14677278 ~ 14729072 (+)
G115725 NA non-coding downstream 78724 14696090 ~ 14696527 (+)
G115756 NA non-coding downstream 108035 14725401 ~ 14727994 (+)
G115289 NA other upstream 195334 14406044 ~ 14407912 (+)
G115189 NA other upstream 366392 14234514 ~ 14236854 (+)
G115190 NA other upstream 458979 14141882 ~ 14144267 (+)
LOC110535330 LOC106574784 other upstream 640434 13961020 ~ 13976561 (+)
esrp1 LOC106605950 other downstream 388227 15005556 ~ 15026595 (+)
G115854 NA other downstream 413073 15030439 ~ 15031445 (+)

Expression


Co-expression Network