G115371


Basic Information

Item Value
gene id G115371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14639244 ~ 14639618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU132508
AAATATCCAGATGAAAATCCTGTGTTTCTTTGtcaattttttgtttgttatatttcggtcttctgtgatgtatataaagtgtaatattgggatgcaaactcaaaatgtaatacatttcaactctatatctgacatggtacaggtgtcttctttttttgaagcccataaccatgtgtgtgaggtgtatacttttgtttcaaagcatatttgtttaagactaacaagaatcactctgtgaccctgatttagcccactgagGTAATTAAGGAGCTACGAATGTTCATGCTGAGACTGTTGTGGTAATATTAGGTCAAACTTAAATCGAAATGTTCTAGAAGTCGTCTGAGGACTTCCAAGACAAGGTCAAATGTATAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132508 True 375 lncRNA 0.43 1 14639244 14639618

Neighbor

gene id symbol gene type direction distance location
sec61b sc61b coding upstream 74131 14556397 ~ 14565113 (+)
galnt1 galnt1 coding upstream 141463 14430901 ~ 14497781 (+)
trnat-ugu NA coding upstream 230506 14408666 ~ 14408738 (+)
LOC118936243 cklf7 coding upstream 282518 14344891 ~ 14356726 (+)
LOC110490457 LOC106605965 coding upstream 296027 14339490 ~ 14343217 (+)
nr4a3 nr4a3 coding downstream 70304 14709922 ~ 14744937 (+)
stx17 stx17 coding downstream 113837 14753455 ~ 14775822 (+)
LOC110535632 invs coding downstream 154584 14794202 ~ 14837595 (+)
si:ch211-197h24.6 LOC106574428 coding downstream 221031 14860649 ~ 14867713 (+)
tmem67 LOC106606053 coding downstream 231187 14870805 ~ 14882237 (+)
G115365 NA non-coding upstream 21878 14603246 ~ 14617366 (+)
G115363 NA non-coding upstream 28592 14584449 ~ 14610652 (+)
G115362 NA non-coding upstream 53747 14584757 ~ 14585497 (+)
G115361 NA non-coding upstream 61088 14577908 ~ 14578156 (+)
G115346 NA non-coding upstream 81147 14535641 ~ 14558097 (+)
G115703 NA non-coding downstream 4107 14643725 ~ 14643930 (+)
G115720 NA non-coding downstream 37660 14677278 ~ 14729072 (+)
G115725 NA non-coding downstream 56472 14696090 ~ 14696527 (+)
G115756 NA non-coding downstream 85783 14725401 ~ 14727994 (+)
G115761 NA non-coding downstream 108508 14748126 ~ 14748365 (+)
G115289 NA other upstream 231332 14406044 ~ 14407912 (+)
G115189 NA other upstream 402390 14234514 ~ 14236854 (+)
G115190 NA other upstream 494977 14141882 ~ 14144267 (+)
LOC110535330 LOC106574784 other upstream 676432 13961020 ~ 13976561 (+)
esrp1 LOC106605950 other downstream 365975 15005556 ~ 15026595 (+)
G115854 NA other downstream 390821 15030439 ~ 15031445 (+)

Expression


Co-expression Network