G115784



Basic Information


Item Value
gene id G115784
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 14859834 ~ 14860568 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU133044
CTTGATGTTGAGCTTCCGGTGTGTGGTGGGTGCATTAGCATCTTTCTTCAGCTGTTCAGTTAGGTTTATTCCCTTGGTGCGGAAGTTGATGTTGGTGGCGTTGTCAGCTTTAGGCTTAGTCTTCCCCACCTTCAGCTTGACCTTCTGAAAGTCATCctgcctcttcttcttcttgcACTTGGTCATCTCTGCAGGATAGGACTGTGTGTTGACACTGTCAGAAATAATTGTGCATGCAGTAGCGTTCCCGCGCCGAATGTAGCTTTTGAAGACTGTCAATCAGTAAAATCAAGCTCGTGTTGTTTCTTCACAAACATGGGCCTTTCTCTTTGATACGACAACTTTCTAAGCTGTCTTCACATTTGCCTGCAACATTCGTTTGTTTTTTCCTGTTCTCAATTTCACGTCTACATATATCAGTGTTTTATTGCAACTTGTGTAAAGGATACATTtcaaa

Function


NR:

description
testis-expressed protein 10 homolog, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU133044 True 457 lncRNA 0.43 2 14859834 14860568

Neighbor


gene id symbol gene type direction distance location
LOC110535632 invs coding upstream 22239 14794202 ~ 14837595 (+)
stx17 stx17 coding upstream 85366 14753455 ~ 14775822 (+)
nr4a3 nr4a3 coding upstream 114897 14709922 ~ 14744937 (+)
sec61b sc61b coding upstream 294721 14556397 ~ 14565113 (+)
galnt1 galnt1 coding upstream 362053 14430901 ~ 14497781 (+)
si:ch211-197h24.6 LOC106574428 coding downstream 81 14860649 ~ 14867713 (+)
tmem67 LOC106606053 coding downstream 10237 14870805 ~ 14882237 (+)
LOC110535729 LOC106606054 coding downstream 21926 14882494 ~ 14892852 (+)
rnf41l LOC106570746 coding downstream 113773 14974341 ~ 14981270 (+)
esrp1 LOC106605950 coding downstream 144988 15005556 ~ 15026595 (+)
G115763 NA non-coding upstream 109568 14749935 ~ 14750266 (+)
G115761 NA non-coding upstream 111469 14748126 ~ 14748365 (+)
G115720 NA non-coding upstream 130762 14677278 ~ 14729072 (+)
G115785 NA non-coding downstream 33132 14893700 ~ 14894908 (+)
G115786 NA non-coding downstream 33744 14894312 ~ 14894587 (+)
G115801 NA non-coding downstream 51802 14912370 ~ 14914389 (+)
G115810 NA non-coding downstream 73330 14933898 ~ 14934139 (+)
G115289 NA other upstream 451922 14406044 ~ 14407912 (+)
G115189 NA other upstream 622980 14234514 ~ 14236854 (+)
G115190 NA other upstream 715567 14141882 ~ 14144267 (+)
G115854 NA other downstream 169871 15030439 ~ 15031445 (+)
LOC110508003 LOC106605954 other downstream 234622 15094896 ~ 15108480 (+)

Expression



Co-expression Network