XLOC_020950 (BX649485.2)



Basic Information


Item Value
gene id XLOC_020950
gene name BX649485.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 11090338 ~ 11091099 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00041209
AAGATCGACCTCAGAGACCTTCAGCGAGAGCTCAGAATGAAGACGCTGCTGCTTTCCCTTCTCTGTTTTCTGGTGTGGAATCAACACACTGAAGCTTTGACTGATCAACAGGTGACTTTAGGAGAGACTGTGACTTTAGCTTGTGAGTTTAAATGTAAAGCTGCTATATGGTTTGTGATAAAACCGTCAGCTCGTCCGATGATGATCATGAGGACTTTTGGAACCCAAGAGGCTGATTACTACGATGAAAAACTGCGCAGCAAATATTCAGAGGGAAGCAGAAGCCacttaataatcaataatgtcaGTGCTGATGATCTGGGCGATTATTACTGTATTAAAGCAGGCTTCGCTCTAAACATCGGTGATGGCATCAGACTACACACCTCTGAAGTCTGAGGTGAAGTTCAACTGGTGTGACAGAAGAATTGAGTGAACCagacttttcttctcctcttcAGAACGAAAAATATAAATTGGTGACATGCTGAGAGATTGATTATGTTTTCTGCAGATGATTAGACTTGTGTGTGTGATCTGCTTAAACATTATatgaaataatgattaaataaatcattacTTTTGAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095801

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00041209 True 587 lncRNA 0.40 3 11090338 11091099

Neighbor


gene id symbol gene type direction distance location
XLOC_020949 NA coding downstream 638 11087404 ~ 11089700 (-)
XLOC_020947 use1 coding downstream 11270 11070842 ~ 11079068 (-)
XLOC_020946 insrb coding downstream 36094 10927370 ~ 11054244 (-)
XLOC_020945 NA coding downstream 163380 10922765 ~ 10926958 (-)
XLOC_020944 BX908744.2 coding downstream 172545 10903510 ~ 10917793 (-)
XLOC_020951 NA coding upstream 11806 11102905 ~ 11104271 (-)
XLOC_020952 atp6ap2 coding upstream 32388 11123487 ~ 11137268 (-)
XLOC_020953 mid1ip1b coding upstream 345348 11436447 ~ 11438627 (-)
XLOC_020954 tspan7b coding upstream 349606 11440705 ~ 11493236 (-)
XLOC_020955 slc26a11 coding upstream 406267 11497366 ~ 11520405 (-)
XLOC_020943 BX908744.1 non-coding downstream 189362 10895963 ~ 10900976 (-)
XLOC_020940 BX908398.1 non-coding downstream 326291 10763933 ~ 10764047 (-)
XLOC_020961 NA non-coding upstream 581090 11672189 ~ 11674421 (-)
XLOC_020962 NA non-coding upstream 606173 11697272 ~ 11698675 (-)
XLOC_020969 CR847870.5 non-coding upstream 1493740 12584839 ~ 12584954 (-)
XLOC_020972 CR847870.3 non-coding upstream 1608022 12699121 ~ 12726556 (-)

Expression



Co-expression Network