XLOC_020951


Basic Information

Item Value
gene id XLOC_020951
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 11102905 ~ 11104271 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042350
tatcAAGACAAAATCAAACAGAAGGCATGCTGAAAACATCATTTTTACATTACCTATGTAAAATTTACAAACATCAGTCAATTTGAAACAAGAGTCAGCAATCAAGCGAACATTATTTTGCTTTCATTATTCAGCAGAACATGATTCTGTAGACTGcaatgataatgataattatatgCGTCTGGTTTTTGTCATTGGATTTTGAAAAGGAGCAAAAGTGTTGTTGTTCGGTTGAAAAAGACGAAACTCCACTTcagaaaactacaaaaaaaaaaaacagaaatgagcTTCTGATGTCCACATAGAAAGATCTCAACACCTTTAGAGGAGTGAATAAGAGATAATGTTGTACCTCTGCCGCACTTGTGCAGAAAATCTTCTCCAGTTCCTcattttgttgttgtcttttcttACACAGTTGAAGTTTGATCTGAAATAGGGCTAAAAAAAAAGCACCAACATTTCTCATTTAATATCCTAAACTGCATGATATGTATCATAAAGTGTTGAGtattatctgttattttacattaagcAGAATCCTGCGATCTCACCTATTACTGCAGAAAACATCATGATGTTCAGTATGATGTATAAAACTATCAGAGCCTCCTGCGTCGTTTGATAATGAGACTCGTTTGGTTTTGTCTGACTCTTATCTTCTGTGATGTAGAGTCTGGTGCCGTTGCTGAACTTTATAGTTGTACTGTCTCTTTTTATACAGTAATATACTCCTATTTCATCAATAGTTATGCTACTAATAAACAAACGGCTCAAAGTGAGTGATGAATATTTGTTTCTGAATCTTTCCTCTAATATATGAGATACTGTAGATTCTGTTGAGAAAGTCCGCAGTATCAGCACTGGAGCATCTGTCAGTTTctggaaaacccaaaacatctcTTTTACATCAATCTGACAGTCTAATGTCACATTTTCACCTAAATTTACCCGTTTATCAAATAAACCTTCTGTAATTTGACACCACAGCAGCAGATCtatcaaaaaaaaacatttatgtaaaaTGATGTACatcatttacacaacaataaaattCCGATcataagaagatttttttaaaaatccaacaCAAAGTTAGACTTACAGAGGAGTAAAAGCAGCGTCGTCTTCattctgtgtttgtgtgactcACATGCAGTAAGTTGGTTGACTTTATTGTGAATGTAAGAGGAAGTGCAGCTTCAGGAAGAGAACGTCAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042350 True 1220 lncRNA 0.34 2 11102905 11104271

Neighbor

gene id symbol gene type direction distance location
XLOC_020948 NA coding downstream 5068 11082942 ~ 11097837 (-)
XLOC_020950 BX649485.2 coding downstream 11806 11090338 ~ 11091099 (-)
XLOC_020949 NA coding downstream 13205 11087404 ~ 11089700 (-)
XLOC_020947 use1 coding downstream 23837 11070842 ~ 11079068 (-)
XLOC_020946 insrb coding downstream 48661 10927370 ~ 11054244 (-)
XLOC_020952 atp6ap2 coding upstream 19216 11123487 ~ 11137268 (-)
XLOC_020953 mid1ip1b coding upstream 332176 11436447 ~ 11438627 (-)
XLOC_020954 tspan7b coding upstream 336434 11440705 ~ 11493236 (-)
XLOC_020955 slc26a11 coding upstream 393095 11497366 ~ 11520405 (-)
XLOC_020956 gnav1 coding upstream 434121 11538392 ~ 11594414 (-)
XLOC_020945 NA non-coding downstream 175947 10922765 ~ 10926958 (-)
XLOC_020944 BX908744.2 non-coding downstream 185112 10903510 ~ 10917793 (-)
XLOC_020961 NA non-coding upstream 567918 11672189 ~ 11674421 (-)
XLOC_020962 NA non-coding upstream 593001 11697272 ~ 11698675 (-)
XLOC_020969 CR847870.5 non-coding upstream 1480568 12584839 ~ 12584954 (-)
XLOC_020972 CR847870.3 non-coding upstream 1594850 12699121 ~ 12726556 (-)
XLOC_020975 NA non-coding upstream 1673618 12777889 ~ 12786441 (-)

Expression


Co-expression Network