G115884


Basic Information

Item Value
gene id G115884
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 15112799 ~ 15113008 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU133175
CTGGCCTGTCTGAGTGTTATCCTGTGGTGGTTGGCCAGAGTGGGGGTAGTGTATCCATACTCCTGGGAGGCATGGCTCAGTGCCATCAGACAGTCCAGCTCAGCACTCAGATCcagaacctacacacacacacgtagcatAATCCCACAAAAAGGTAAGTGTGCACACAGAGATACCGCTTAAAGACGCACACCTTGTACAGACAGGCGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106606036 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133175 True 210 lncRNA 0.53 1 15112799 15113008

Neighbor

gene id symbol gene type direction distance location
LOC110508003 LOC106605954 coding upstream 4319 15094896 ~ 15108480 (+)
LOC110520775 LOC106605953 coding upstream 21446 15079627 ~ 15091353 (+)
LOC110533650 LOC106592818 coding upstream 36180 15068668 ~ 15076619 (+)
esrp1 LOC106605950 coding upstream 86204 15005556 ~ 15026595 (+)
rnf41l LOC106570746 coding upstream 131876 14974341 ~ 14981270 (+)
LOC110507970 LOC106606114 coding downstream 47164 15160172 ~ 15170433 (+)
LOC110535768 fam171a1 coding downstream 144261 15257269 ~ 15311917 (+)
LOC110535774 LOC106576081 coding downstream 202592 15315600 ~ 15326000 (+)
LOC110535811 acbd7 coding downstream 216564 15329572 ~ 15336358 (+)
LOC110535783 LOC106606004 coding downstream 242840 15355848 ~ 15368210 (+)
G115883 NA non-coding upstream 2108 15110471 ~ 15110691 (+)
G115857 NA non-coding upstream 19250 15092002 ~ 15093549 (+)
G115880 NA non-coding upstream 30518 15081997 ~ 15082281 (+)
G115886 NA non-coding downstream 2496 15115504 ~ 15115736 (+)
G115887 NA non-coding downstream 3893 15116901 ~ 15117103 (+)
G115888 NA non-coding downstream 5529 15118537 ~ 15118754 (+)
G115890 NA non-coding downstream 7920 15120928 ~ 15121154 (+)
G115891 NA non-coding downstream 8211 15121219 ~ 15197958 (+)
G115854 NA other upstream 81354 15030439 ~ 15031445 (+)
tmem67 LOC106606053 other upstream 234124 14870805 ~ 14882237 (+)
si:ch211-197h24.6 LOC106574428 other upstream 247516 14860649 ~ 14867713 (+)
G116207 NA other downstream 158194 15271202 ~ 15271609 (+)
G116224 NA other downstream 224422 15337430 ~ 15337702 (+)
LOC110535842 LOC106605985 other downstream 337460 15448845 ~ 15451856 (+)

Expression


Co-expression Network