G116211


Basic Information

Item Value
gene id G116211
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 15285025 ~ 15285953 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU133569
ggtcataggagtaacaacatgaatttgtgaaTGAGGTGGAAATAAtgcggtgcgactcgagtttcgccaACAGCTGGAAGAAGgggtccctttttggtcagtttCAGTGGAGGAACgggagagcggagggatgttgagaggtggaccctcagtctgctgctctctccctccgctgagactgaccctcagtctgctgctctctccctctgctgagactgaccctcagtctgctgctctctccctccgctgagactgaccctcagtctgctgctctctccctctgctgagactgaccctcagtctgctgctctctccctctgctgagactgaccctcagtctgctgctctctccctctgctgagactgaccctcagtctgctgctctctccctccgctgagactgaccctcagtctgctgctctctccctctgctgagactgaccctcagtctgctgctctctccctccgctgagactgaccctcagtctgctgctctctccctccgctgagactgaccctcagtctgctgctctctccctccgctgagactgaccctcagtctgctgctctctccctccgctgagactgaccctcagtctgctgctctctccctctgctgagactgaccctcagtctgctgctctctccctccgctgagactgaccctcagtctgctgctctctccctctgctgagactgaccctcagtctgctgctctctccctctgctgagactgaccctcagtctgctgctctctccttccgctgagactgaccctcagtctgctgctctctccctctgctgagactgaccctcagtctgctgctctctccctctgctgagactgaccctcagtctgctgctctctccctctgctgagactgaaactcagtctgctgctctctccctccgctgagactgaccatcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133569 True 929 lncRNA 0.59 1 15285025 15285953

Neighbor

gene id symbol gene type direction distance location
LOC110507970 LOC106606114 coding upstream 114592 15160172 ~ 15170433 (+)
LOC110508003 LOC106605954 coding upstream 176545 15094896 ~ 15108480 (+)
LOC110520775 LOC106605953 coding upstream 193672 15079627 ~ 15091353 (+)
LOC110533650 LOC106592818 coding upstream 208406 15068668 ~ 15076619 (+)
esrp1 LOC106605950 coding upstream 258430 15005556 ~ 15026595 (+)
LOC110535774 LOC106576081 coding downstream 29647 15315600 ~ 15326000 (+)
LOC110535811 acbd7 coding downstream 43619 15329572 ~ 15336358 (+)
LOC110535783 LOC106606004 coding downstream 69895 15355848 ~ 15368210 (+)
LOC110534183 LOC106576069 coding downstream 88684 15374637 ~ 15400616 (+)
rundc3b LOC106576055 coding downstream 151939 15437892 ~ 15448698 (+)
G116210 NA non-coding upstream 6742 15277951 ~ 15278283 (+)
G116209 NA non-coding upstream 8558 15276173 ~ 15276467 (+)
G116208 NA non-coding upstream 12815 15271936 ~ 15272210 (+)
G116205 NA non-coding upstream 17707 15267117 ~ 15267318 (+)
G116197 NA non-coding upstream 21755 15262680 ~ 15263270 (+)
G116212 NA non-coding downstream 93 15286046 ~ 15286284 (+)
G116213 NA non-coding downstream 547 15286500 ~ 15286770 (+)
G116218 NA non-coding downstream 7518 15293471 ~ 15293979 (+)
G116219 NA non-coding downstream 9189 15295142 ~ 15304868 (+)
G116190 NA non-coding downstream 26893 15312846 ~ 15313608 (+)
G116207 NA other upstream 13416 15271202 ~ 15271609 (+)
G115854 NA other upstream 253580 15030439 ~ 15031445 (+)
tmem67 LOC106606053 other upstream 406350 14870805 ~ 14882237 (+)
G116224 NA other downstream 51477 15337430 ~ 15337702 (+)
LOC110535842 LOC106605985 other downstream 164515 15448845 ~ 15451856 (+)
G117048 NA other downstream 897733 16182890 ~ 16185784 (+)

Expression

G116211 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
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G116211 Expression in each Bioproject

Bar chart with 21 bars.
G116211 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network