G116212


Basic Information

Item Value
gene id G116212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 15286046 ~ 15286284 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU133570
ccggtgtgatcatatagccccaaatgttttaatataaaaacattttttaaatgtcccaaactacaatgcattggcagggcaattcaagcaaagccagtatgtggtgataatgtattgggcctgtagcttactgcacaaacctcattgctacagtactgtttttaattggtttctcaaatgattgcctcgcctggttcaccaactacttctctgatagagttcagtgtgtcaaatcggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133570 True 239 lncRNA 0.40 1 15286046 15286284

Neighbor

gene id symbol gene type direction distance location
LOC110507970 LOC106606114 coding upstream 115613 15160172 ~ 15170433 (+)
LOC110508003 LOC106605954 coding upstream 177566 15094896 ~ 15108480 (+)
LOC110520775 LOC106605953 coding upstream 194693 15079627 ~ 15091353 (+)
LOC110533650 LOC106592818 coding upstream 209427 15068668 ~ 15076619 (+)
esrp1 LOC106605950 coding upstream 259451 15005556 ~ 15026595 (+)
LOC110535774 LOC106576081 coding downstream 29316 15315600 ~ 15326000 (+)
LOC110535811 acbd7 coding downstream 43288 15329572 ~ 15336358 (+)
LOC110535783 LOC106606004 coding downstream 69564 15355848 ~ 15368210 (+)
LOC110534183 LOC106576069 coding downstream 88353 15374637 ~ 15400616 (+)
rundc3b LOC106576055 coding downstream 151608 15437892 ~ 15448698 (+)
G116211 NA non-coding upstream 93 15285025 ~ 15285953 (+)
G116210 NA non-coding upstream 7763 15277951 ~ 15278283 (+)
G116209 NA non-coding upstream 9579 15276173 ~ 15276467 (+)
G116208 NA non-coding upstream 13836 15271936 ~ 15272210 (+)
G116205 NA non-coding upstream 18728 15267117 ~ 15267318 (+)
G116213 NA non-coding downstream 216 15286500 ~ 15286770 (+)
G116218 NA non-coding downstream 7187 15293471 ~ 15293979 (+)
G116219 NA non-coding downstream 8858 15295142 ~ 15304868 (+)
G116190 NA non-coding downstream 26562 15312846 ~ 15313608 (+)
G116207 NA other upstream 14437 15271202 ~ 15271609 (+)
G115854 NA other upstream 254601 15030439 ~ 15031445 (+)
tmem67 LOC106606053 other upstream 407371 14870805 ~ 14882237 (+)
G116224 NA other downstream 51146 15337430 ~ 15337702 (+)
LOC110535842 LOC106605985 other downstream 164184 15448845 ~ 15451856 (+)
G117048 NA other downstream 897402 16182890 ~ 16185784 (+)

Expression


Co-expression Network