G116213


Basic Information

Item Value
gene id G116213
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 15286500 ~ 15286770 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU133571
ctccttccgtggcctccaattgctcttaaatacaagtaaaactaaatgcatgctccttaaccgatcgctacctgcacctacccgcctgtccaacatcactactctggacggctctgacttagaatacgtggacaactacaaatacttaggtgtctggttagactgtaaactctccttccagacccatatcaaacatctccaatccaaagttaaatctagaattggcttcctatttcgcaacaaagcatccttcactcatgctgccaaacat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133571 True 271 lncRNA 0.44 1 15286500 15286770

Neighbor

gene id symbol gene type direction distance location
LOC110507970 LOC106606114 coding upstream 116067 15160172 ~ 15170433 (+)
LOC110508003 LOC106605954 coding upstream 178020 15094896 ~ 15108480 (+)
LOC110520775 LOC106605953 coding upstream 195147 15079627 ~ 15091353 (+)
LOC110533650 LOC106592818 coding upstream 209881 15068668 ~ 15076619 (+)
esrp1 LOC106605950 coding upstream 259905 15005556 ~ 15026595 (+)
LOC110535774 LOC106576081 coding downstream 28830 15315600 ~ 15326000 (+)
LOC110535811 acbd7 coding downstream 42802 15329572 ~ 15336358 (+)
LOC110535783 LOC106606004 coding downstream 69078 15355848 ~ 15368210 (+)
LOC110534183 LOC106576069 coding downstream 87867 15374637 ~ 15400616 (+)
rundc3b LOC106576055 coding downstream 151122 15437892 ~ 15448698 (+)
G116212 NA non-coding upstream 216 15286046 ~ 15286284 (+)
G116211 NA non-coding upstream 547 15285025 ~ 15285953 (+)
G116210 NA non-coding upstream 8217 15277951 ~ 15278283 (+)
G116209 NA non-coding upstream 10033 15276173 ~ 15276467 (+)
G116208 NA non-coding upstream 14290 15271936 ~ 15272210 (+)
G116218 NA non-coding downstream 6701 15293471 ~ 15293979 (+)
G116219 NA non-coding downstream 8372 15295142 ~ 15304868 (+)
G116190 NA non-coding downstream 26076 15312846 ~ 15313608 (+)
G116239 NA non-coding downstream 111076 15397846 ~ 15398916 (+)
G116207 NA other upstream 14891 15271202 ~ 15271609 (+)
G115854 NA other upstream 255055 15030439 ~ 15031445 (+)
tmem67 LOC106606053 other upstream 407825 14870805 ~ 14882237 (+)
G116224 NA other downstream 50660 15337430 ~ 15337702 (+)
LOC110535842 LOC106605985 other downstream 163698 15448845 ~ 15451856 (+)
G117048 NA other downstream 896916 16182890 ~ 16185784 (+)

Expression


Co-expression Network