G116323


Basic Information

Item Value
gene id G116323
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 15567226 ~ 15575737 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU133720
gggttaccagaacaatatgtctgtcttggttcagagtgtagccagggttaccagaacaatatgtctgtcttggttcagagtgtagccagggttaccagaacaatatgtctgtcttggttcagagtgtagccatggtaaccagaacaatacgtctgtcttggttcagaagagtgtagccagggttaccagaacaatatgtctgtcttggttcagaagagtgtagccagggttaccagaacaatatgtctttcttggttcagaagagtgtagccagggttaccagaacaatatgtctgtcttggttcagaagagtgtagccagggttaccagaacaatatgtttGTCTTGGTTCAgattgtagccagggttaccagaacaatatgtctgttttggatcagagtgtagccagggtaaccagaacaatatgtctgtcttggttcagattgtagccagggtaaccagaacaatatgtctgtcgtggttcagagtgtagccagggttaccagaacaatatgtctgttttggttcagagtgtagccagggtaaccagaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106609981 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133720 True 553 lncRNA 0.44 2 15567226 15575737
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110535823 LOC106576036 coding upstream 89271 15467158 ~ 15477955 (+)
LOC110535842 LOC106605985 coding upstream 115370 15448845 ~ 15451856 (+)
rundc3b LOC106576055 coding upstream 118692 15437892 ~ 15448698 (+)
LOC110534183 LOC106576069 coding upstream 166610 15374637 ~ 15400616 (+)
LOC110535783 LOC106606004 coding upstream 199016 15355848 ~ 15368210 (+)
osgin2 osgin2 coding downstream 48240 15623977 ~ 15633803 (+)
LOC110535935 LOC106575347 coding downstream 96249 15671986 ~ 15681594 (+)
LOC110534191 LOC105029233 coding downstream 115395 15691132 ~ 15694443 (+)
LOC110535950 LOC106575322 coding downstream 125449 15701186 ~ 15734894 (+)
ecm1b ecm1 coding downstream 166593 15742330 ~ 15755295 (+)
G116289 NA non-coding upstream 63381 15503282 ~ 15503845 (+)
G116269 NA non-coding upstream 88049 15478624 ~ 15479177 (+)
G116252 NA non-coding upstream 153553 15410895 ~ 15413673 (+)
G116239 NA non-coding upstream 168310 15397846 ~ 15398916 (+)
G116325 NA non-coding downstream 17458 15593195 ~ 15603938 (+)
LOC110535866 gtpbp10 non-coding downstream 34965 15482391 ~ 15614954 (+)
G116340 LOC106575260 non-coding downstream 69160 15644897 ~ 15649115 (+)
G116368 NA non-coding downstream 123676 15699413 ~ 15699661 (+)
G116224 NA other upstream 229524 15337430 ~ 15337702 (+)
LOC110535811 acbd7 other upstream 230868 15329572 ~ 15336358 (+)
G116207 NA other upstream 295617 15271202 ~ 15271609 (+)
G117048 NA other downstream 607949 16182890 ~ 16185784 (+)
LOC110536275 s10i other downstream 1419973 16995630 ~ 16998361 (+)
G117704 NA other downstream 1474395 17050132 ~ 17050839 (+)
G117714 LOC106605886 other downstream 1497464 17073201 ~ 17073701 (+)
LOC110520798 fam189b other downstream 1824276 17395343 ~ 17421816 (+)

Expression

G116323 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 50.
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G116323 Expression in each Bioproject

Bar chart with 18 bars.
G116323 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network