G116325


Basic Information

Item Value
gene id G116325
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 15593195 ~ 15603938 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU133722
atctctctctctctctctctctcacactctctccctttctccttctctctcgctaactctcctactctctctcactctctctctaactctctctaacACTCTCTAACTCTCctactctctaactctctctatctaactctcctactctctctcctactttctctctctctctctctctcaaactctctctctctctaactctcattctaactctttccctctcccccttttaACACAAAGACTGTGAGAGGTTTTGGTTCGACATACGTATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133722 True 274 lncRNA 0.44 2 15593195 15603938

Neighbor

gene id symbol gene type direction distance location
LOC110535823 LOC106576036 coding upstream 115240 15467158 ~ 15477955 (+)
LOC110535842 LOC106605985 coding upstream 141339 15448845 ~ 15451856 (+)
rundc3b LOC106576055 coding upstream 144661 15437892 ~ 15448698 (+)
LOC110534183 LOC106576069 coding upstream 192579 15374637 ~ 15400616 (+)
LOC110535783 LOC106606004 coding upstream 224985 15355848 ~ 15368210 (+)
osgin2 osgin2 coding downstream 20039 15623977 ~ 15633803 (+)
LOC110535935 LOC106575347 coding downstream 68048 15671986 ~ 15681594 (+)
LOC110534191 LOC105029233 coding downstream 87194 15691132 ~ 15694443 (+)
LOC110535950 LOC106575322 coding downstream 97248 15701186 ~ 15734894 (+)
ecm1b ecm1 coding downstream 138392 15742330 ~ 15755295 (+)
G116323 NA non-coding upstream 17458 15567226 ~ 15575737 (+)
G116289 NA non-coding upstream 89350 15503282 ~ 15503845 (+)
G116269 NA non-coding upstream 114018 15478624 ~ 15479177 (+)
G116252 NA non-coding upstream 179522 15410895 ~ 15413673 (+)
LOC110535866 gtpbp10 non-coding downstream 6764 15482391 ~ 15614954 (+)
G116340 LOC106575260 non-coding downstream 40959 15644897 ~ 15649115 (+)
G116368 NA non-coding downstream 95475 15699413 ~ 15699661 (+)
G116416 NA non-coding downstream 212500 15816438 ~ 15816979 (+)
G116224 NA other upstream 255493 15337430 ~ 15337702 (+)
LOC110535811 acbd7 other upstream 256837 15329572 ~ 15336358 (+)
G116207 NA other upstream 321586 15271202 ~ 15271609 (+)
G117048 NA other downstream 579748 16182890 ~ 16185784 (+)
LOC110536275 s10i other downstream 1391772 16995630 ~ 16998361 (+)
G117704 NA other downstream 1446194 17050132 ~ 17050839 (+)
G117714 LOC106605886 other downstream 1469263 17073201 ~ 17073701 (+)
LOC110520798 fam189b other downstream 1796075 17395343 ~ 17421816 (+)

Expression


Co-expression Network