G116368


Basic Information

Item Value
gene id G116368
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 15699413 ~ 15699661 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU133791
gcatggtaactaactgatactagcaggcatggtaactaactgataatactaggcatggtaactaactgataatactaggcatggtaactaattgataatactaggcatggtaactaactgataatacTAGAAATGAAAGCTAACTGAAAATAATATgtctggtaactaactgatactagtggCCCATTTCTCTGGAGTTTCTGATATAATTAGTGTTTCATAG

Function

NR:

description
PREDICTED: alanine aminotransferase 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133791 True 223 lncRNA 0.35 2 15699413 15699661

Neighbor

gene id symbol gene type direction distance location
LOC110534191 LOC105029233 coding upstream 4970 15691132 ~ 15694443 (+)
LOC110535935 LOC106575347 coding upstream 17819 15671986 ~ 15681594 (+)
osgin2 osgin2 coding upstream 65610 15623977 ~ 15633803 (+)
LOC110535866 gtpbp10 coding upstream 85146 15482391 ~ 15614954 (+)
LOC110535823 LOC106576036 coding upstream 221458 15467158 ~ 15477955 (+)
LOC110535950 LOC106575322 coding downstream 1525 15701186 ~ 15734894 (+)
ecm1b ecm1 coding downstream 42669 15742330 ~ 15755295 (+)
LOC110535970 LOC106575371 coding downstream 60288 15759949 ~ 15783001 (+)
LOC110535991 LOC100194679 coding downstream 83948 15783609 ~ 15787419 (+)
znf687a LOC106575274 coding downstream 88132 15787793 ~ 15801771 (+)
G116340 LOC106575260 non-coding upstream 50298 15644897 ~ 15649115 (+)
G116325 NA non-coding upstream 95475 15593195 ~ 15603938 (+)
G116323 NA non-coding upstream 123676 15567226 ~ 15575737 (+)
G116289 NA non-coding upstream 195568 15503282 ~ 15503845 (+)
G116416 NA non-coding downstream 116777 15816438 ~ 15816979 (+)
G116429 NA non-coding downstream 138965 15838626 ~ 15840462 (+)
G116442 NA non-coding downstream 166261 15865922 ~ 15866182 (+)
G116446 NA non-coding downstream 168977 15868638 ~ 15868837 (+)
LOC110535842 LOC106605985 other upstream 247725 15448845 ~ 15451856 (+)
LOC110535783 LOC106606004 other upstream 332624 15355848 ~ 15368210 (+)
G116224 NA other upstream 361711 15337430 ~ 15337702 (+)
LOC110535811 acbd7 other upstream 363055 15329572 ~ 15336358 (+)
G116207 NA other upstream 427804 15271202 ~ 15271609 (+)
G117048 NA other downstream 484025 16182890 ~ 16185784 (+)
LOC110536275 s10i other downstream 1296049 16995630 ~ 16998361 (+)
G117704 NA other downstream 1350471 17050132 ~ 17050839 (+)
G117714 LOC106605886 other downstream 1373540 17073201 ~ 17073701 (+)
LOC110520798 fam189b other downstream 1700352 17395343 ~ 17421816 (+)

Expression


Co-expression Network