Gene
RNA
| Item | Value |
|---|---|
| gene id | G116446 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 15868638 ~ 15868837 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU133877 | True | 200 | lncRNA | 0.39 | 1 | 15868638 | 15868837 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937786 | NA | coding | upstream | 42108 | 15820843 ~ 15826530 (+) |
| znf687a | LOC106575274 | coding | upstream | 66867 | 15787793 ~ 15801771 (+) |
| LOC110535991 | LOC100194679 | coding | upstream | 81219 | 15783609 ~ 15787419 (+) |
| LOC110535970 | LOC106575371 | coding | upstream | 85637 | 15759949 ~ 15783001 (+) |
| ecm1b | ecm1 | coding | upstream | 113343 | 15742330 ~ 15755295 (+) |
| LOC110536080 | LOC106575458 | coding | downstream | 154911 | 16023748 ~ 16035989 (+) |
| LOC110536089 | LOC106575512 | coding | downstream | 239974 | 16108811 ~ 16117559 (+) |
| chrnb2 | LOC106575520 | coding | downstream | 264933 | 16133770 ~ 16173038 (+) |
| LOC110536177 | LOC100286671 | coding | downstream | 421308 | 16290145 ~ 16298549 (+) |
| LOC110512627 | efna3 | coding | downstream | 647244 | 16516081 ~ 16667428 (+) |
| G116442 | NA | non-coding | upstream | 2456 | 15865922 ~ 15866182 (+) |
| G116429 | NA | non-coding | upstream | 28176 | 15838626 ~ 15840462 (+) |
| G116416 | NA | non-coding | upstream | 51659 | 15816438 ~ 15816979 (+) |
| LOC110535950 | LOC106575322 | non-coding | upstream | 133744 | 15701186 ~ 15734894 (+) |
| G116368 | NA | non-coding | upstream | 168977 | 15699413 ~ 15699661 (+) |
| G116454 | il6ra | non-coding | downstream | 11047 | 15879884 ~ 15917888 (+) |
| G116464 | NA | non-coding | downstream | 34812 | 15903649 ~ 15919088 (+) |
| G116514 | NA | non-coding | downstream | 118576 | 15987413 ~ 15987641 (+) |
| G116526 | NA | non-coding | downstream | 143157 | 16011994 ~ 16013927 (+) |
| LOC110535842 | LOC106605985 | other | upstream | 416950 | 15448845 ~ 15451856 (+) |
| LOC110535783 | LOC106606004 | other | upstream | 501849 | 15355848 ~ 15368210 (+) |
| G116224 | NA | other | upstream | 530936 | 15337430 ~ 15337702 (+) |
| LOC110535811 | acbd7 | other | upstream | 532280 | 15329572 ~ 15336358 (+) |
| G116207 | NA | other | upstream | 597029 | 15271202 ~ 15271609 (+) |
| G117048 | NA | other | downstream | 314849 | 16182890 ~ 16185784 (+) |
| LOC110536275 | s10i | other | downstream | 1126873 | 16995630 ~ 16998361 (+) |
| G117704 | NA | other | downstream | 1181295 | 17050132 ~ 17050839 (+) |
| G117714 | LOC106605886 | other | downstream | 1204364 | 17073201 ~ 17073701 (+) |
| LOC110520798 | fam189b | other | downstream | 1531176 | 17395343 ~ 17421816 (+) |
