G116514


Basic Information

Item Value
gene id G116514
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 15987413 ~ 15987641 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU133968
CATCCCtgccatccggctggacaacttTCTGACTGCCCGCGGATGTCCGGATCGGGACCtgtcagttccatcccccagcacctctGCTCcgatgcccatggagctgggaggtgctgcactTAGGGCACCCGGACTAGGGGCCATTccctgcaccatctgtggccgcagagggcacactgctggtcggtgctggaGGGGTCCCTcagggagtcgaggcagcaggcagggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133968 True 229 lncRNA 0.53 1 15987413 15987641

Neighbor

gene id symbol gene type direction distance location
LOC118937786 NA coding upstream 160883 15820843 ~ 15826530 (+)
znf687a LOC106575274 coding upstream 185642 15787793 ~ 15801771 (+)
LOC110535991 LOC100194679 coding upstream 199994 15783609 ~ 15787419 (+)
LOC110535970 LOC106575371 coding upstream 204412 15759949 ~ 15783001 (+)
ecm1b ecm1 coding upstream 232118 15742330 ~ 15755295 (+)
LOC110536080 LOC106575458 coding downstream 36107 16023748 ~ 16035989 (+)
LOC110536089 LOC106575512 coding downstream 121170 16108811 ~ 16117559 (+)
chrnb2 LOC106575520 coding downstream 146129 16133770 ~ 16173038 (+)
LOC110536177 LOC100286671 coding downstream 302504 16290145 ~ 16298549 (+)
LOC110512627 efna3 coding downstream 528440 16516081 ~ 16667428 (+)
G116464 NA non-coding upstream 68325 15903649 ~ 15919088 (+)
G116454 il6ra non-coding upstream 69525 15879884 ~ 15917888 (+)
G116446 NA non-coding upstream 118576 15868638 ~ 15868837 (+)
G116442 NA non-coding upstream 121231 15865922 ~ 15866182 (+)
G116429 NA non-coding upstream 146951 15838626 ~ 15840462 (+)
G116526 NA non-coding downstream 24353 16011994 ~ 16013927 (+)
G116536 NA non-coding downstream 74327 16061968 ~ 16062376 (+)
G116541 NA non-coding downstream 81667 16069308 ~ 16071179 (+)
G116542 NA non-coding downstream 86278 16073919 ~ 16075195 (+)
LOC110535842 LOC106605985 other upstream 535725 15448845 ~ 15451856 (+)
LOC110535783 LOC106606004 other upstream 620624 15355848 ~ 15368210 (+)
G116224 NA other upstream 649711 15337430 ~ 15337702 (+)
LOC110535811 acbd7 other upstream 651055 15329572 ~ 15336358 (+)
G116207 NA other upstream 715804 15271202 ~ 15271609 (+)
G117048 NA other downstream 196045 16182890 ~ 16185784 (+)
LOC110536275 s10i other downstream 1008069 16995630 ~ 16998361 (+)
G117704 NA other downstream 1062491 17050132 ~ 17050839 (+)
G117714 LOC106605886 other downstream 1085560 17073201 ~ 17073701 (+)
LOC110520798 fam189b other downstream 1412372 17395343 ~ 17421816 (+)

Expression


Co-expression Network