Gene
RNA
| Item | Value |
|---|---|
| gene id | G116541 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 16069308 ~ 16071179 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU133999 | True | 465 | lncRNA | 0.44 | 2 | 16069308 | 16071179 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536080 | LOC106575458 | coding | upstream | 33319 | 16023748 ~ 16035989 (+) |
| LOC118937786 | NA | coding | upstream | 242778 | 15820843 ~ 15826530 (+) |
| znf687a | LOC106575274 | coding | upstream | 267537 | 15787793 ~ 15801771 (+) |
| LOC110535991 | LOC100194679 | coding | upstream | 281889 | 15783609 ~ 15787419 (+) |
| LOC110535970 | LOC106575371 | coding | upstream | 286307 | 15759949 ~ 15783001 (+) |
| LOC110536089 | LOC106575512 | coding | downstream | 37632 | 16108811 ~ 16117559 (+) |
| chrnb2 | LOC106575520 | coding | downstream | 62591 | 16133770 ~ 16173038 (+) |
| LOC110536177 | LOC100286671 | coding | downstream | 218966 | 16290145 ~ 16298549 (+) |
| LOC110512627 | efna3 | coding | downstream | 444902 | 16516081 ~ 16667428 (+) |
| LOC118936591 | LOC106574320 | coding | downstream | 662154 | 16733333 ~ 16747286 (+) |
| G116536 | NA | non-coding | upstream | 6932 | 16061968 ~ 16062376 (+) |
| G116526 | NA | non-coding | upstream | 55381 | 16011994 ~ 16013927 (+) |
| G116514 | NA | non-coding | upstream | 81667 | 15987413 ~ 15987641 (+) |
| G116464 | NA | non-coding | upstream | 150220 | 15903649 ~ 15919088 (+) |
| G116542 | NA | non-coding | downstream | 2740 | 16073919 ~ 16075195 (+) |
| G116543 | NA | non-coding | downstream | 5855 | 16077034 ~ 16080072 (+) |
| G116545 | LOC106575505 | non-coding | downstream | 10837 | 16082016 ~ 16082650 (+) |
| G116548 | NA | non-coding | downstream | 19383 | 16090562 ~ 16092319 (+) |
| G116590 | NA | non-coding | downstream | 97906 | 16169085 ~ 16169354 (+) |
| LOC110535842 | LOC106605985 | other | upstream | 617620 | 15448845 ~ 15451856 (+) |
| LOC110535783 | LOC106606004 | other | upstream | 702519 | 15355848 ~ 15368210 (+) |
| G116224 | NA | other | upstream | 731606 | 15337430 ~ 15337702 (+) |
| LOC110535811 | acbd7 | other | upstream | 732950 | 15329572 ~ 15336358 (+) |
| G116207 | NA | other | upstream | 797699 | 15271202 ~ 15271609 (+) |
| G117048 | NA | other | downstream | 112507 | 16182890 ~ 16185784 (+) |
| LOC110536275 | s10i | other | downstream | 924531 | 16995630 ~ 16998361 (+) |
| G117704 | NA | other | downstream | 978953 | 17050132 ~ 17050839 (+) |
| G117714 | LOC106605886 | other | downstream | 1002022 | 17073201 ~ 17073701 (+) |
| LOC110520798 | fam189b | other | downstream | 1328834 | 17395343 ~ 17421816 (+) |
