G117040


Basic Information

Item Value
gene id G117040
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 16171188 ~ 16174033 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU134623
gCGTGTCCAAATCCCACCCCACCAGGACCTGTTATAGCCAGATTCAGAGggaggaggaacagagggatggagagagattgaCAGAGGGAACATAACATGAGCAATCTGTCGTtcagagaagaggggaggagatagAAAAAGTGTAGAAAGAAAGGAGGGGGCTGAGAGAGCAGGAGTGAGGGAAGGAAGGTGGTGCTTCAGTGTGTAGGTGGGCTGGTCATTACCCTAATTTCATACCCCAATATCTATACTACAGAtgtccagggagagagagaacgagggaagaAGTGAGACAACGAGGGAAGTAACTCTCTTGCACATTGCGTCGGACAGATATGATAATGCAGTGGGcaatgagtacacacacacacatcggacATTAAGTAAATTAACCTGGCCAATTACTGTAATAACTATAGGTGGCGTGTGTtctgacaataataataatacagccTTACACACCGTTACACACTGGGGAGAGTTAGCTACAGAGCACAACACAatctgagagagggaggacaggagggggaaggaggagaggagagagtcagctaCAGAGCACAACACTatctgagagagggaggacaggagggggaaggaggagaggagagagtcagctaCAGAGCACAACGCAATCTAAGAAAGGGAGGACAGGAGGCGGAAGGAGGGAGGACAggtgggggaaggaggagaggagagaaggaggagaggagagagggggaaggagggaaggacaggagggggaaggaggtgaggagagagcggAATGAGGGgcaagaaggagaggagagagggggaaggaggaaagggcaggaggtggaaggaggggaggacatgaggaggaaggaggagaggagagagggagaaggaggggaggacaggagggggaaggaggggaggagagagggaggaaaggaagagaggagagagggagaaggaggggaggacaggagggggaaggaggggaggagatagggaggaaaggaagagaggacagagtgagACACTGTCTTACTCTGATAATGAGAATCACAGTGATGACAGAAATGAACATTTATGCAAACATTCATAACACACAATAGCTTATGTTTCATGAGAAAACATCCTTATTCCAACAATACATATCATCTGTCAGTTCTATATTCGACCACCCAATTTTGTGCAATCATGGCTCAACTGTAAAAGGAGGGAATTTCCTCCATCTTGGCTCAACCCAATCTCAGTTTCCCAGGAACTGAATCTAAACTCATCCCCTTGCAACTGTACCCGATGGCACAAGCTGCTATTATCCCAATAGAGCTGTATATGCAGACATCCTACACCTTTATCTTTCTCTAAGGTTGAATCCCAAATCACCCCATTCGCCTGGCCCCTCGGCACTCCATTTGCGCGTTCACACGAGCCTCCGCCATTTGCACAAGTGTACTAAAGCTGAGGGAGTGAAAATTGGGTGTAGGGGCTAATTAGATCCTCCTATAGCCACTTCGACCTAGCCAGCACGGATGCAGGCTTCAGAGCGAAGTGCTATCCCAACACTCACTGCTATATGTCTGAAGTTAGCACAATTGAATTGTAAAAAACGGAGAGGCGTGTCTAATTATATACCACGTGCATGTGTTTATGTCTGATTCAGAGACTGGTCCCGGTGGGTTTATTGATCCCATCGACACTCTCTGGAAGTCACCCTCGGAGCTTCGTCAACAACACGTGACAACGGAGGGAGTTGGTATTGGCAAGGGGGCGGTTTGGGATTCACTATAACTACTTCATCTCATTCCATCTAACTCTCTGTcaatatccctctctctctttcatctctctccttcacgATCTGTCTCTTCTACTCATATAGTGTTAGCGTGCACGTCACAGGCTGTGTAGTACAGGTAATATCACATTCTTGTTTAAAAGCGTAGAGAATCATACAACAAACCACTGCACCCTACCTTTCTCTCAGGAAGACACAGAGAAATCGCAATAACATTATATTCAAAGCTATACTGTGGTACACTGCTATGCTATGGtaaaatatactgtactgtactatcagTTGGCTTAATAACAGAAGTGGCTTGGAAAAAcaattgcctttacatttttctGATTGGTTGACACAGTTTCCAATCAAGGTTCTGTTACTGAAGCATTAAGTTCTGTACCAGTTAAGGTGCAACAATATACTCTCAGTAAGCTTGCACAGTCAGCTTGGAATGAAGAGCATTGATTGGCTGGCGTAGCGTTCTACAGGATGTCAAACAATTTAGAGATTGTCCTCTCTCCCTGATCactcagagggagagaggagaggcataaCTCCACCTTCCTCTGGGAAAAAGGGAAGAGTTGTCCATCCATTTATCCCTCCTCTGGAAAAAAAAACGATCTTTAATACGGTGTTGGTGTTAAGTTTAGTTCTTCAGTTCAGAACAGTTCAGTAGAAAGGCTATAAAGGTTAACAGGTGTGGCTCCTGTCCAATATAGTTCCACAGACTTAATAAAACCCACTTCCCCtgctgggcaggtccctccctcCTGCCCCTGTCCTGCTGTGCTGATTGGGTCGGGGCGGTGTCCATCGATGCTGCTGGGAACCTGGTTGGTCAGCCATTGGTGTTGGTGATGGTCTTGGCAGTGTAGTTCTGGAACAGTGGCTGGAGGAACATCCCGACGGTtccggacacacacacaattataaaGATCCACAGGAAGAGACGGTCGATCACCATGGCAACA
>TU134625
gCGTGTCCAAATCCCACCCCACCAGGACCTGTTATAGCCAGATTCAGAGggaggaggaacagagggatggagagagattgaCAGAGGGAACATAACATGAGCAATCTGTCGTtcagagaagaggggaggagatagAAAAAGTGTAGAAAGAAAGGAGGGGGCTGAGAGAGCAGGAGTGAGGGAAGGAAGGTGGTGCTTCAGTGTGTAGGTGGGCTGGTCATTACCCTAATTTCATACCCCAATATCTATACTACAGAtgtccagggagagagagaacgagggaagaAGTGAGACAACGAGGGAAGTAACTCTCTTGCACATTGCGTCGGACAGATATGATAATGCAGTGGGcaatgagtacacacacacacatcggacATTAAGTAAATTAACCTGGCCAATTACTGTAATAACTATAGGTGGCGTGTGTtctgacaataataataatacagccTTACACACCGTTACACACTGGGGAGAGTTAGCTACAGAGCACAACACAatctgagagagggaggacaggagggggaaggaggagaggagagagtcagctaCAGAGCACAACACTatctgagagagggaggacaggagggggaaggaggagaggagagagtcagctaCAGAGCACAACGCAATCTAAGAAAGGGAGGACAGGAGGCGGAAGGAGGGAGGACAggtgggggaaggaggagaggagagaaggaggagaggagagagggggaaggagggaaggacaggagggggaaggaggggaggagagagggggaaggaggaaagggcaggaggtggaaggaggggaggacatgaggaggaaggaggagaggagagagggagaaggaggggaggacaggagggggaaggaggggaggagagagggaggaaaggaagagaggagagagggagaaggaggggaggacaggagggggaaggaggggaggagatagggaggaaaggaagagaggacagagtgagACACTGTCTTACTCTGATAATGAGAATCACAGTGATGACAGAAATGAACATTTATGCAAACATTCATAACACACAATAGCTTATGTTTCATGAGAAAACATCCTTATTCCAACAATACATATCATCTGTCAGTTCTATATTCGACCACCCAATTTTGTGCAATCATGGCTCAACTGTAAAAGGAGGGAATTTCCTCCATCTTGGCTCAACCCAATCTCAGTTTCCCAGGAACTGAATCTAAACTCATCCCCTTGCAACTGTACCCGATGGCACAAGCTGCTATTATCCCAATAGAGCTGTATATGCAGACATCCTACACCTTTATCTTTCTCTAAGGTTGAATCCCAAATCACCCCATTCGCCTGGCCCCTCGGCACTCCATTTGCGCGTTCACACGAGCCTCCGCCATTTGCACAAGTGTACTAAAGCTGAGGGAGTGAAAATTGGGTGTAGGGGCTAATTAGATCCTCCTATAGCCACTTCGACCTAGCCAGCACGGATGCAGGCTTCAGAGCGAAGTGCTATCCCAACACTCACTGCTATATGTCTGAAGTTAGCACAATTGAATTGTAAAAAACGGAGAGGCGTGTCTAATTATATACCACGTGCATGTGTTTATGTCTGATTCAGAGACTGGTCCCGGTGGGTTTATTGATCCCATCGACACTCTCTGGAAGTCACCCTCGGAGCTTCGTCAACAACACGTGACAACGGAGGGAGTTGGTATTGGCAAGGGGGCGGTTTGGGATTCACTATAACTACTTCATCTCATTCCATCTAACTCTCTGTcaatatccctctctctctttcatctctctccttcacgATCTGTCTCTTCTACTCATATAGTGTTAGCGTGCACGTCACAGGCTGTGTAGTACAGGTAATATCACATTCTTGTTTAAAAGCGTAGAGAATCATACAACAAACCACTGCACCCTACCTTTCTCTCAGGAAGACACAGAGAAATCGCAATAACATTATATTCAAAGCTATACTGTGGTACACTGCTATGCTATGGtaaaatatactgtactgtactatcagTTGGCTTAATAACAGAAGTGGCTTGGAAAAAcaattgcctttacatttttctGATTGGTTGACACAGTTTCCAATCAAGGTTCTGTTACTGAAGCATTAAGTTCTGTACCAGTTAAGGTGCAACAATATACTCTCAGTAAGCTTGCACAGTCAGCTTGGAATGAAGAGCATTGATTGGCTGGCGTAGCGTTCTACAGGATGTCAAACAATTTAGAGATTGTCCTCTCTCCCTGATCactcagagggagagaggagaggcataaCTCCACCTTCCTCTGGGAAAAAGGGAAGAGTTGTCCATCCATTTATCCCTCCTCTGGAAAAAAAAACGATCTTTAATACGGTGTTGGTGTTAAGTTTAGTTCTTCAGTTCAGAACAGTTCAGTAGAAAGGCTATAAAGGTTAACAGGTGTGGCTCCTGTCCAATATAGTTCCACAGACTTAATAAAACCCACTTCCCCtgctgggcaggtccctccctcCTGCCCCTGTCCTGCTGTGCTGATTGGGTCGGGGCGGTGTCCATCGATGCTGCTGGGAACCTGGTTGGTCAGCCATTGGTGTTGGTGATGGTCTTGGCAGTGTAGTTCTGGAACAGTGGCTGGAGGAACATCCCGACGGTtccggacacacacacaattataaaGATCCACAGGAAGAGACGGTCGATCACCATGGCAACA
>TU134626
gCGTGTCCAAATCCCACCCCACCAGGACCTGTTATAGCCAGATTCAGAGggaggaggaacagagggatggagagagattgaCAGAGGGAACATAACATGAGCAATCTGTCGTtcagagaagaggggaggagatagAAAAAGTGTAGAAAGAAAGGAGGGGGCTGAGAGAGCAGGAGTGAGGGAAGGAAGGTGGTGCTTCAGTGTGTAGGTGGGCTGGTCATTACCCTAATTTCATACCCCAATATCTATACTACAGAtgtccagggagagagagaacgagggaagaAGTGAGACAACGAGGGAAGTAACTCTCTTGCACATTGCGTCGGACAGATATGATAATGCAGTGGGcaatgagtacacacacacacatcggacATTAAGTAAATTAACCTGGCCAATTACTGTAATAACTATAGGTGGCGTGTGTtctgacaataataataatacagccTTACACACCGTTACACACTGGGGAGAGTTAGCTACAGAGCACAACACAatctgagagagggaggacaggagggggaaggaggagaggagagagtcagctaCAGAGCACAACACTatctgagagagggaggacaggaggCGGAAGGAGGGAGGACAggtgggggaaggaggagaggagagaaggaggagaggagagagggggaaggagggaaggacaggagggggaaggaggtgaggagagagcggAATGAGGGgcaagaaggagaggagagagggggaaggaggaaagggcaggagggggaaggaggggaggagagagggggaaggaggaaagggcaggaggtggaaggaggggaggacatgaggaggaaggaggagaggagagagggagaaggaggggaggacaggagggggaaggaggggaggagagagggaggaaaggaagagaggacagagtgagACACTGTCTTACTCTGATAATGAGAATCACAGTGATGACAGAAATGAACATTTATGCAAACATTCATAACACACAATAGCTTATGTTTCATGAGAAAACATCCTTATTCCAACAATACATATCATCTGTCAGTTCTATATTCGACCACCCAATTTTGTGCAATCATGGCTCAACTGTAAAAGGAGGGAATTTCCTCCATCTTGGCTCAACCCAATCTCAGTTTCCCAGGAACTGAATCTAAACTCATCCCCTTGCAACTGTACCCGATGGCACAAGCTGCTATTATCCCAATAGAGCTGTATATGCAGACATCCTACACCTTTATCTTTCTCTAAGGTTGAATCCCAAATCACCCCATTCGCCTGGCCCCTCGGCACTCCATTTGCGCGTTCACACGAGCCTCCGCCATTTGCACAAGTGTACTAAAGCTGAGGGAGTGAAAATTGGGTGTAGGGGCTAATTAGATCCTCCTATAGCCACTTCGACCTAGCCAGCACGGATGCAGGCTTCAGAGCGAAGTGCTATCCCAACACTCACTGCTATATGTCTGAAGTTAGCACAATTGAATTGTAAAAAACGGAGAGGCGTGTCTAATTATATACCACGTGCATGTGTTTATGTCTGATTCAGAGACTGGTCCCGGTGGGTTTATTGATCCCATCGACACTCTCTGGAAGTCACCCTCGGAGCTTCGTCAACAACACGTGACAACGGAGGGAGTTGGTATTGGCAAGGGGGCGGTTTGGGATTCACTATAACTACTTCATCTCATTCCATCTAACTCTCTGTcaatatccctctctctctttcatctctctccttcacgATCTGTCTCTTCTACTCATATAGTGTTAGCGTGCACGTCACAGGCTGTGTAGTACAGGTAATATCACATTCTTGTTTAAAAGCGTAGAGAATCATACAACAAACCACTGCACCCTACCTTTCTCTCAGGAAGACACAGAGAAATCGCAATAACATTATATTCAAAGCTATACTGTGGTACACTGCTATGCTATGGtaaaatatactgtactgtactatcagTTGGCTTAATAACAGAAGTGGCTTGGAAAAAcaattgcctttacatttttctGATTGGTTGACACAGTTTCCAATCAAGGTTCTGTTACTGAAGCATTAAGTTCTGTACCAGTTAAGGTGCAACAATATACTCTCAGTAAGCTTGCACAGTCAGCTTGGAATGAAGAGCATTGATTGGCTGGCGTAGCGTTCTACAGGATGTCAAACAATTTAGAGATTGTCCTCTCTCCCTGATCactcagagggagagaggagaggcataaCTCCACCTTCCTCTGGGAAAAAGGGAAGAGTTGTCCATCCATTTATCCCTCCTCTGGAAAAAAAAACGATCTTTAATACGGTGTTGGTGTTAAGTTTAGTTCTTCAGTTCAGAACAGTTCAGTAGAAAGGCTATAAAGGTTAACAGGTGTGGCTCCTGTCCAATATAGTTCCACAGACTTAATAAAACCCACTTCCCCtgctgggcaggtccctccctcCTGCCCCTGTCCTGCTGTGCTGATTGGGTCGGGGCGGTGTCCATCGATGCTGCTGGGAACCTGGTTGGTCAGCCATTGGTGTTGGTGATGGTCTTGGCAGTGTAGTTCTGGAACAGTGGCTGGAGGAACATCCCGACGGTtccggacacacacacaattataaaGATCCACAGGAAGAGACGGTCGATCACCATGGCAACA

Function

NR:

description
PREDICTED: neuronal acetylcholine receptor subunit beta-2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134623 False 2733 lncRNA 0.48 2 16171188 16174033
TU134625 False 2702 lncRNA 0.48 2 16171188 16174033
TU134626 True 2643 lncRNA 0.41 4 16171188 16174033

Neighbor

gene id symbol gene type direction distance location
LOC110534219 LOC106575505 coding downstream 63156 16079813 ~ 16108032 (-)
tuft1a LOC106575420 coding downstream 103889 16040245 ~ 16067299 (-)
si:dkey-92i15.4 LOC106595411 coding downstream 151747 16006770 ~ 16019441 (-)
aqp10a LOC106575444 coding downstream 166485 15992668 ~ 16004703 (-)
LOC110518702 atp8b2 coding downstream 189091 15898225 ~ 15982097 (-)
s100t LOC106575525 coding upstream 2826 16176859 ~ 16180610 (-)
LOC110536103 s10ag coding upstream 15907 16189940 ~ 16195762 (-)
LOC110536110 LOC106573847 coding upstream 25954 16199987 ~ 16201548 (-)
LOC110536122 LOC106573839 coding upstream 29031 16203014 ~ 16208363 (-)
LOC110536154 LOC106575541 coding upstream 43438 16217471 ~ 16245556 (-)
G117038 NA non-coding downstream 2837 16167955 ~ 16168351 (-)
G117008 NA non-coding downstream 22019 16102835 ~ 16149169 (-)
G116929 NA non-coding downstream 78874 16091104 ~ 16092314 (-)
G117006 NA non-coding downstream 84093 16086732 ~ 16087095 (-)
G116920 NA non-coding downstream 133368 16037423 ~ 16037820 (-)
G117041 NA non-coding upstream 1195 16175228 ~ 16175525 (-)
G117327 NA non-coding upstream 15340 16189373 ~ 16189628 (-)
G117333 NA non-coding upstream 40003 16214036 ~ 16217352 (-)
G117354 NA non-coding upstream 82714 16256747 ~ 16259206 (-)
G117335 LOC100286671 non-coding upstream 117797 16291830 ~ 16298545 (-)
LOC110536013 NA other downstream 313484 15778980 ~ 15857764 (-)
G116835 LOC100194679 other downstream 383773 15775325 ~ 15787415 (-)
LOC110535911 LOC106595606 other downstream 499843 15668207 ~ 15671859 (-)
G118273 NA other upstream 653638 16827671 ~ 16828022 (-)
G118303 NA other upstream 759536 16933569 ~ 16934290 (-)
G118319 NA other upstream 821487 16916621 ~ 16998362 (-)

Expression


Co-expression Network