G117041



Basic Information


Item Value
gene id G117041
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 16175228 ~ 16175525 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU134627
GGAATGCATTAATCAAACATTACAAATGGTACTAAAACACATATGCAAACACACAATCCTGTAAATGTGCACATACAACAGTTGGTTGGCAGTAGGAAGAACTTGAAATTACCTTGAAACAGGCCTGTTAGTACAGTAATAGTTTATTTTACTGTAACGCTACAGCACTTTGAATCAGGTTACTGGCCATAATGTTTGTTTTACTGTAAAGCTACGGGTCTTTGAATCAGGTTACTGGCCATAATGTTTGTTTTACTGTAAAGCTACAGCACTTTGAATCAGGTTACTGGCCATAATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU134627 True 298 lncRNA 0.48 1 16175228 16175525

Neighbor


gene id symbol gene type direction distance location
LOC110534219 LOC106575505 coding downstream 67196 16079813 ~ 16108032 (-)
tuft1a LOC106575420 coding downstream 107929 16040245 ~ 16067299 (-)
si:dkey-92i15.4 LOC106595411 coding downstream 155787 16006770 ~ 16019441 (-)
aqp10a LOC106575444 coding downstream 170525 15992668 ~ 16004703 (-)
LOC110518702 atp8b2 coding downstream 193131 15898225 ~ 15982097 (-)
s100t LOC106575525 coding upstream 1334 16176859 ~ 16180610 (-)
LOC110536103 s10ag coding upstream 14415 16189940 ~ 16195762 (-)
LOC110536110 LOC106573847 coding upstream 24462 16199987 ~ 16201548 (-)
LOC110536122 LOC106573839 coding upstream 27539 16203014 ~ 16208363 (-)
LOC110536154 LOC106575541 coding upstream 41946 16217471 ~ 16245556 (-)
G117040 NA non-coding downstream 1195 16171188 ~ 16174033 (-)
G117038 NA non-coding downstream 6877 16167955 ~ 16168351 (-)
G117008 NA non-coding downstream 26059 16102835 ~ 16149169 (-)
G116929 NA non-coding downstream 82914 16091104 ~ 16092314 (-)
G117006 NA non-coding downstream 88133 16086732 ~ 16087095 (-)
G117327 NA non-coding upstream 13848 16189373 ~ 16189628 (-)
G117333 NA non-coding upstream 38511 16214036 ~ 16217352 (-)
G117354 NA non-coding upstream 81222 16256747 ~ 16259206 (-)
G117335 LOC100286671 non-coding upstream 116305 16291830 ~ 16298545 (-)
G117362 NA non-coding upstream 126023 16301548 ~ 16301846 (-)
LOC110536013 NA other downstream 317524 15778980 ~ 15857764 (-)
G116835 LOC100194679 other downstream 387813 15775325 ~ 15787415 (-)
LOC110535911 LOC106595606 other downstream 503883 15668207 ~ 15671859 (-)
G118273 NA other upstream 652146 16827671 ~ 16828022 (-)
G118303 NA other upstream 758044 16933569 ~ 16934290 (-)
G118319 NA other upstream 819995 16916621 ~ 16998362 (-)

Expression



Co-expression Network