Gene
RNA
| Item | Value |
|---|---|
| gene id | G117083 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 16227681 ~ 16229049 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106565965 isoform X13 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU134695 | True | 802 | lncRNA | 0.37 | 4 | 16227681 | 16229049 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| chrnb2 | LOC106575520 | coding | upstream | 54643 | 16133770 ~ 16173038 (+) |
| LOC110536089 | LOC106575512 | coding | upstream | 110122 | 16108811 ~ 16117559 (+) |
| LOC110536080 | LOC106575458 | coding | upstream | 191692 | 16023748 ~ 16035989 (+) |
| LOC118937786 | NA | coding | upstream | 401151 | 15820843 ~ 15826530 (+) |
| znf687a | LOC106575274 | coding | upstream | 425910 | 15787793 ~ 15801771 (+) |
| LOC110536177 | LOC100286671 | coding | downstream | 61096 | 16290145 ~ 16298549 (+) |
| LOC110512627 | efna3 | coding | downstream | 287032 | 16516081 ~ 16667428 (+) |
| LOC118936591 | LOC106574320 | coding | downstream | 504284 | 16733333 ~ 16747286 (+) |
| LOC110520867 | LOC106606111 | coding | downstream | 530687 | 16759736 ~ 16767223 (+) |
| LOC110536210 | LOC106574226 | coding | downstream | 642493 | 16871542 ~ 16875899 (+) |
| G117078 | NA | non-coding | upstream | 4940 | 16222298 ~ 16222741 (+) |
| G117069 | NA | non-coding | upstream | 10293 | 16214033 ~ 16217388 (+) |
| G117059 | NA | non-coding | upstream | 26354 | 16198969 ~ 16201327 (+) |
| G117048 | NA | non-coding | upstream | 41980 | 16182890 ~ 16185784 (+) |
| G116561 | NA | non-coding | upstream | 52905 | 16174119 ~ 16174776 (+) |
| G117088 | NA | non-coding | downstream | 6903 | 16235952 ~ 16236717 (+) |
| G117067 | NA | non-coding | downstream | 20389 | 16249438 ~ 16252646 (+) |
| G117105 | NA | non-coding | downstream | 60669 | 16289718 ~ 16289974 (+) |
| G117072 | NA | non-coding | downstream | 71703 | 16300752 ~ 16302164 (+) |
| G117117 | NA | non-coding | downstream | 92793 | 16321842 ~ 16322418 (+) |
| LOC110535842 | LOC106605985 | other | upstream | 775993 | 15448845 ~ 15451856 (+) |
| LOC110535783 | LOC106606004 | other | upstream | 860892 | 15355848 ~ 15368210 (+) |
| G116224 | NA | other | upstream | 889979 | 15337430 ~ 15337702 (+) |
| LOC110535811 | acbd7 | other | upstream | 891323 | 15329572 ~ 15336358 (+) |
| LOC110536275 | s10i | other | downstream | 766661 | 16995630 ~ 16998361 (+) |
| G117704 | NA | other | downstream | 821083 | 17050132 ~ 17050839 (+) |
| G117714 | LOC106605886 | other | downstream | 844152 | 17073201 ~ 17073701 (+) |
| LOC110520798 | fam189b | other | downstream | 1170964 | 17395343 ~ 17421816 (+) |
| G117735 | NA | other | downstream | 1226716 | 17455765 ~ 17458022 (+) |
