G117072


Basic Information

Item Value
gene id G117072
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 16300752 ~ 16302164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU134681
atcgcgctctagcaactccatgtggtgggccgggtgcctgcaagctgacaaCGATCGCCAGTTGGACCGTGTTTCCTcagacacgttggtgcggctggcttctgggttaacgagcagtgtgtcaagaagcagtgtggcttgactTTCGCCACTCCCGTGTCCGTAGTGGAGTCGCAGCGATGGGTCAAGACTAACTATCAATTGGATATCAAAAAAGGGGTCAAATAAAAAACAAAGGGCTCTATTTTATCAGATCCTTTTTAGCCGACATCTGCATAGCGCTTGTTTTGGCCGTGTCGGCGGTGGAACTGcattagggtggcaggtagcctagcagttaaagCATTGGAACAGTCACTGAAAGGTtgttggttcaaatccctgagccgacagaAATCTGTCAGTGCCCTTGAGTAAAGCGCTTTAaccttaattgctcctgtaagttgctctggataagagcatcagcTAAATGACTAAAGTGTAAATCCACAAGCAGCTCCTGGAATTATAGCATTAATAGAAATCCCATGCAGATTTGTTGGAACACAGTGTGAGATATAGATTAATCTACACCTTGATTAGGATGGTAGAAAACCTCATTATTCCATTTAATGATTTTTCAATTTGAGCATGATTATTTCTGTATAGCTTACACTTTCTGTTTCAGAACTTCTAACGTGGGTGGgggtgtggcttcgtgacaatgatcGCAAGAGCAGCTGTTCACTGTTTTAACTGGTCCAACCCAGCTCCACCTCCAACAtgccaaaacatcagctatgcaGGTGTCTGCTATCGCTTGATGTGATTTCATCCATATGGGCCTTAATGTATAGTATATGGTGCAATCTAAAACGGCATATAATTAAAAAGTCCTACAGCTACTGCAAAGTAGTCTAATCTACATTCAAATTCCACGACAAAGACAtacccacagagatcctattaaattacaaGAAACCCTCAATATTCACATATAATTAGGCCTACAGTTTATACACATCTTCCAAAATATATGCAAACAGACAAATGTCTCAATGtttgttttcttggaaagctgAGTGTTAGAATATGATGCATTATCCATATTGCTGCATTTACAACTTGCCTAAGTCCTAGCATCAACGGATTTCAGCCAGTGGATGGCTGTGGATTGATTGCATTTGTTTGTATGGAATGTTAATAATTGATGTAACTTTTATAGCGCTTTTCTTTTCAGAAAATGTCAAAGTGCATAAAAAGCAAACAACCAATATAAATTTagatggtagagatggagatTGAATATTCCTTTGGCTTCGGATGAAAGGCTGGAATTTAAGGCAGTTTGGATTGAAAGGCGTTGCTTCAGGAGAAAGGCTGGGAGATGAGGCAGTTTGGATTGAAAGGCGGCAGTGTTGCTTCAGGAGA

Function

NR:

description
PREDICTED: UDP-N-acetylglucosamine transporter-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134681 True 1413 lncRNA 0.42 1 16300752 16302164

Neighbor

gene id symbol gene type direction distance location
LOC110536177 LOC100286671 coding upstream 2203 16290145 ~ 16298549 (+)
chrnb2 LOC106575520 coding upstream 127714 16133770 ~ 16173038 (+)
LOC110536089 LOC106575512 coding upstream 183193 16108811 ~ 16117559 (+)
LOC110536080 LOC106575458 coding upstream 264763 16023748 ~ 16035989 (+)
LOC118937786 NA coding upstream 474222 15820843 ~ 15826530 (+)
LOC110512627 efna3 coding downstream 213917 16516081 ~ 16667428 (+)
LOC118936591 LOC106574320 coding downstream 431169 16733333 ~ 16747286 (+)
LOC110520867 LOC106606111 coding downstream 457572 16759736 ~ 16767223 (+)
LOC110536210 LOC106574226 coding downstream 569378 16871542 ~ 16875899 (+)
LOC110536226 kcp2 coding downstream 573830 16875994 ~ 16879352 (+)
G117105 NA non-coding upstream 10778 16289718 ~ 16289974 (+)
G117053 s10ag non-coding upstream 35827 16190034 ~ 16264925 (+)
G117067 NA non-coding upstream 48106 16249438 ~ 16252646 (+)
G117088 NA non-coding upstream 64035 16235952 ~ 16236717 (+)
G117083 NA non-coding upstream 71703 16227681 ~ 16229049 (+)
G117117 NA non-coding downstream 19678 16321842 ~ 16322418 (+)
G117125 NA non-coding downstream 34491 16336655 ~ 16337975 (+)
G117131 NA non-coding downstream 51917 16354081 ~ 16359309 (+)
G117133 NA non-coding downstream 58701 16360865 ~ 16390622 (+)
G117145 NA non-coding downstream 109253 16411417 ~ 16417280 (+)
G117048 NA other upstream 114968 16182890 ~ 16185784 (+)
LOC110535842 LOC106605985 other upstream 849064 15448845 ~ 15451856 (+)
LOC110535783 LOC106606004 other upstream 933963 15355848 ~ 15368210 (+)
G116224 NA other upstream 963050 15337430 ~ 15337702 (+)
LOC110535811 acbd7 other upstream 964394 15329572 ~ 15336358 (+)
LOC110536275 s10i other downstream 693546 16995630 ~ 16998361 (+)
G117704 NA other downstream 747968 17050132 ~ 17050839 (+)
G117714 LOC106605886 other downstream 771037 17073201 ~ 17073701 (+)
LOC110520798 fam189b other downstream 1097849 17395343 ~ 17421816 (+)
G117735 NA other downstream 1153601 17455765 ~ 17458022 (+)

Expression


Co-expression Network