G117407


Basic Information

Item Value
gene id G117407
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 16413718 ~ 16414705 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU135087
tttagctctattctacctctactatactttacctctactctattctacctgtactatactttacctctattctacctctactctattcTGCCTGTACTATattttacctctattctacctctactatactctattctacctctactatactttacctctattctacctctactatactctattctacctctactatactttagctctattctacctctactatactttagctctattctacctctactatactctattctacctctgctatactttacctctattctacctctactctattctacctctactataatTTAcatctattctacctctactctactctattctacctttactatactttacctctattctacctctactatactttattctacctctactatactttacctctattctacctctactctattcTGCCTGTACTATattttacctctattctacctctactatactctattctacctctactatactttacctctattctacctctactatactctattctacctatactatactttagctctattctacctctactatactatattctacctctactatactttacctctattctacctttactatactctattctacctctactatactttacctatactctattctacctgtactatactttacctctattctacctctactctattctacctgtactatactttgcctctactctacctctactctattcTGCCTGTACTATattttacctctattctacctctactatactctattctacctctactatactttacctctattctacctctactatactctattctacctctactatactttacctctattctacctttactatactctattctacctctactatac

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU135087 True 909 lncRNA 0.33 3 16413718 16414705

Neighbor

gene id symbol gene type direction distance location
LOC110536161 LOC106593005 coding downstream 124538 16249431 ~ 16289180 (-)
LOC110536166 NA coding downstream 166299 16245769 ~ 16247419 (-)
LOC110536154 LOC106575541 coding downstream 168162 16217471 ~ 16245556 (-)
LOC110536122 LOC106573839 coding downstream 205355 16203014 ~ 16208363 (-)
LOC110536110 LOC106573847 coding downstream 212170 16199987 ~ 16201548 (-)
LOC118937848 NA coding upstream 16078 16430783 ~ 16433481 (-)
LOC118937856 NA coding upstream 128779 16543484 ~ 16544221 (-)
LOC118937862 NA coding upstream 129937 16544642 ~ 16545379 (-)
LOC110536202 LOC105024462 coding upstream 420914 16835619 ~ 16870366 (-)
LOC110519673 LOC106605887 coding upstream 658513 17073218 ~ 17141568 (-)
G117362 NA non-coding downstream 111872 16301548 ~ 16301846 (-)
G117335 LOC100286671 non-coding downstream 115173 16291830 ~ 16298545 (-)
G117354 NA non-coding downstream 154512 16256747 ~ 16259206 (-)
G117333 NA non-coding downstream 196366 16214036 ~ 16217352 (-)
G117327 NA non-coding downstream 224090 16189373 ~ 16189628 (-)
G117427 NA non-coding upstream 39511 16454216 ~ 16454447 (-)
G117431 NA non-coding upstream 46238 16460943 ~ 16462505 (-)
G117471 NA non-coding upstream 123774 16538479 ~ 16547809 (-)
G117508 NA non-coding upstream 225128 16639833 ~ 16649331 (-)
LOC110536103 s10ag other downstream 218101 16189940 ~ 16195762 (-)
LOC110534219 LOC106575505 other downstream 305742 16079813 ~ 16108032 (-)
LOC110518702 atp8b2 other downstream 453716 15898225 ~ 15982097 (-)
LOC110536013 NA other downstream 556014 15778980 ~ 15857764 (-)
G118273 NA other upstream 412966 16827671 ~ 16828022 (-)
G118303 NA other upstream 518864 16933569 ~ 16934290 (-)
G118319 NA other upstream 580815 16916621 ~ 16998362 (-)
G118392 NA other upstream 636476 17051181 ~ 17055124 (-)
LOC110534246 LOC106605885 other upstream 679629 17094247 ~ 17121323 (-)

Expression


Co-expression Network